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Protein Alignment CAH15 and Car5a

DIOPT Version :9

Sequence 1:	NP_611525.1	Gene:	CAH15 / 37366	FlyBaseID:	FBgn0034560	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_031634.2	Gene:	Car5a / 12352	MGIID:	101946	Length:	299	Species:	Mus musculus

Alignment Length:	286	Identity:	68/286 - (23%)
Similarity:	109/286 - (38%)	Gaps:	58/286 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    71 NCRR-------------LRGSPESYNYDWDQGPHTWDTACNNQ-SPINIDMNCVEINYFDTPLIW 121
            ||.|             .|.||  .|..|.      |:..:.| :|:.:..:.....|     :|
Mouse    39 NCARHPLWTGPVSSAEGTRQSP--INIQWK------DSVYDPQLAPLRVSYDAASCRY-----LW 90

  Fly   122 S--HYNSIPLGIRLENNGHTLILRAAFPERTPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLD 184
            :  ::..:......|::|               |.||.|...:..::..|.|......||||.:|
Mouse    91 NTGYFFQVEFDDSCEDSG---------------ISGGPLGNHYRLKQFHFHWGATDEWGSEHAVD 140

  Fly   185 HHHSPLEMQCLHTDGDGCDGCSSS----QGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVE 245
            .|..|.|:..:|.:....:....:    .|:.:|.....|..|:..|..|:..|..|......|.
Mouse   141 GHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVA 205

  Fly   246 VPPFPLSYLMSPFYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQL----RDRRGS 306
            :.||..|.|: |....:::|.||||.||......|::....:.:|..||:.||.|    |.....
Mouse   206 MGPFDPSCLL-PACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEED 269

  Fly   307 RIARNARPVQPIGDRMVYLNRYRTGF 332
            .:..|.||:||:.||     :.|:.|
Mouse   270 VMVNNYRPLQPLRDR-----KLRSSF 290

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.