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Protein Alignment CAH15 and Car4

DIOPT Version :9

Sequence 1:	NP_611525.1	Gene:	CAH15 / 37366	FlyBaseID:	FBgn0034560	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_031633.1	Gene:	Car4 / 12351	MGIID:	1096574	Length:	305	Species:	Mus musculus

Alignment Length:	263	Identity:	74/263 - (28%)
Similarity:	115/263 - (43%)	Gaps:	51/263 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    89 GPHTWDTAC--NNQSPINIDMNCVEINYFDTPLIWSHYN---SIPLGIRLENNGHTLILRAAFPE 148
            ||..|..||  |.||||||.....::|...||.|...|:   ..|    ::||.||:       |
Mouse    37 GPEKWPGACKENQQSPINIVTARTKVNPRLTPFILVGYDQKQQWP----IKNNQHTV-------E 90

  Fly   149 RT----PSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCLH---TDGDGCDGCS 206
            .|    ..|.||||..|::..::...||..:..||||::|..|..:||..:|   |....    .
Mouse    91 MTLGGGACIIGGDLPARYEAVQLHLHWSNGNDNGSEHSIDGRHFAMEMHIVHKKLTSSKE----D 151

  Fly   207 SSQGVLMISYMFDLSEH-NPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSP---FYDKFYSYNG 267
            |.....::::|.::.:. |.....|::.|.::.:......|....|..::.|   .| .::.|||
Mouse   152 SKDKFAVLAFMIEVGDKVNKGFQPLVEALPSISKPHSTSTVRESSLQDMLPPSTKMY-TYFRYNG 215

  Fly   268 SLTEPPCHRGAEWLIYPESLAISERQLNEFRQ-----------LRDRRGSRIARNARPVQPIGDR 321
            |||.|.|.....|.:|.:.:.|.:.|..||.:           ::|        |.||:||:|.|
Mouse   216 SLTTPNCDETVIWTVYKQPIKIHKNQFLEFSKNLYYDEDQKLNMKD--------NVRPLQPLGKR 272

  Fly   322 MVY 324
            .|:
Mouse   273 QVF 275

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.