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Protein Alignment CAH15 and Car3

DIOPT Version :9

Sequence 1:	NP_611525.1	Gene:	CAH15 / 37366	FlyBaseID:	FBgn0034560	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_031632.2	Gene:	Car3 / 12350	MGIID:	88270	Length:	260	Species:	Mus musculus

Alignment Length:	261	Identity:	63/261 - (24%)
Similarity:	104/261 - (39%)	Gaps:	25/261 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    80 ESYNYDWDQGPHTWD-----TACNNQSPINIDMNCVEINYFDTPLIWSHYNSIPLGIRLENNGHT 139
            :.:.|....||..|.     ...:||||  |:::..:|.:..:...||..........:.|||.|
Mouse     3 KEWGYASHNGPDHWHELYPIAKGDNQSP--IELHTKDIKHDPSLQPWSASYDPGSAKTILNNGKT 65

  Fly   140 LILRAAFPER--TPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCLH------ 196
              .|..|.:.  ...:.||.|.|.:..|:....|..:...|||||:|......|:..:|
Mouse    66 --CRVVFDDTYDRSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPKYN 128

  Fly   197 TDGDGCDGCSSSQGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSPFYDK 261
            |.|   :......|:.::.....:........:|:..|..::..|:......|..|.|. |....
Mouse   129 TFG---EALKQPDGIAVVGIFLKIGREKGEFQILLDALDKIKTKGKEAPFTHFDPSCLF-PACRD 189

  Fly   262 FYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQLRDRRGSR----IARNARPVQPIGDRM 322
            :::|:||.|.|||.....||:..|.:.:|..|:.:.|.|.....:.    :..|.||.||:..|:
Mouse   190 YWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFSSAENEPPVPLVGNWRPPQPVKGRV 254

  Fly   323 V 323
            |
Mouse   255 V 255

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.