DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH15 and Car1

DIOPT Version :9

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001077426.1 Gene:Car1 / 12346 MGIID:88268 Length:261 Species:Mus musculus


Alignment Length:265 Identity:70/265 - (26%)
Similarity:110/265 - (41%) Gaps:38/265 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 DW----DQGPHTWDTAC-----NNQSPINIDMNCVEINYFDTPLIWSHYNSI-PLGI-------- 131
            ||    :.||..|....     |||||  ||:...|.|         |.:|: ||.|        
Mouse     5 DWGYGSENGPDQWSKLYPIANGNNQSP--IDIKTSEAN---------HDSSLKPLSISYNPATAK 58

  Fly   132 RLENNGHTLILRAAFPERTPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCLH 196
            .:.|.||:..:..........:.||.|...:...:..|.|..::..|||||:|......|:..:|
Mouse    59 EIVNVGHSFHVIFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSNDHGSEHTVDGTRYSGELHLVH 123

  Fly   197 TD----GDGCDGCSSSQGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSP 257
            .:    ....:..|.:.|:.::..:..:...||.|..::..|.:|:..|:......|..|.|:..
Mouse   124 WNSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNFDPSSLLPS 188

  Fly   258 FYDKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQLRDRRGSR----IARNARPVQPI 318
            ..| :::|.||||.||.|....|:|..:|:::|..||.:.|.|.......    :..|.||.||:
Mouse   189 SLD-YWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPVLSNHRPPQPL 252

  Fly   319 GDRMV 323
            ..|.|
Mouse   253 KGRTV 257

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 70/265 (26%)
Car1NP_001077426.1 alpha_CA 2..261 CDD:381753 70/265 (26%)