DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH15 and ca12

DIOPT Version :10

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_073799348.1 Gene:ca12 / 100537787 ZFINID:ZDB-GENE-080815-4 Length:515 Species:Danio rerio


Alignment Length:268 Identity:73/268 - (27%)
Similarity:120/268 - (44%) Gaps:29/268 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 YNYDWDQGPHTWDT---ACNN--QSPINIDMNCVEINYFDTPLIWSHYN-SIPLGIRLENNGHTL 140
            :.|:...|.|.|.|   .|..  ||||:...:.:..:....|:...:|| |....:.|.||||::
Zfish    22 WTYNGLDGEHDWPTNYPFCGGAFQSPIDFQTHLLRYDPNLPPIQVQNYNLSTSEQLTLGNNGHSV 86

  Fly   141 ILRAAFPERTPS-IDGGDLLGRFDFREISFRWSWASSL-GSEHTLDHHHSPLEMQCLHTDGDGCD 203
            .|      ..|| :....|..|:...::.|.|..::.| |||||::......||..:|.:.|...
Zfish    87 QL------SLPSHMYISSLPHRYSAAQLHFHWGSSNLLTGSEHTVNGKQFAGEMHVVHFNSDKYP 145

  Fly   204 GCSSS----QGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSPFYDKFYS 264
            ..|.:    .|:.::....::.|.||..|.|.:.::.|:...|.::||.|.:..|:....|::|.
Zfish   146 NVSMAVDKHDGLAVLGVFIEIGEANPAFDKLFRFISGVKYRDQKIQVPAFNIRALLPDRLDQYYR 210

  Fly   265 YNGSLTEPPCHRGAEWLIYPESLAISERQL--------NEFRQLRDRRGSRIARNARPVQPIGDR 321
            |:||||.|||:....|.::.:.:.||.:|.        ..|.|  |.....:..|.|..| :.|.
Zfish   211 YDGSLTTPPCYPSVLWTVFRKPVTISRKQFLALATALYASFAQ--DSPSMPLHENYRKSQ-LPDN 272

  Fly   322 MVYLNRYR 329
            .|.|..:|
Zfish   273 RVVLVSFR 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 71/262 (27%)
ca12XP_073799348.1 None

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