DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH15 and ca6

DIOPT Version :10

Sequence 1:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_009295179.1 Gene:ca6 / 100006448 ZFINID:ZDB-GENE-030131-7091 Length:538 Species:Danio rerio


Alignment Length:318 Identity:74/318 - (23%)
Similarity:127/318 - (39%) Gaps:58/318 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VALLVLFNVYTGFSLANRCDEGSNDGCANAGGDNCRRLRGSPESYNYDWDQGPHTW-----DTAC 97
            :.|::||.....|              |:||.|      |...:|:.:.|| .| |     |...
Zfish     4 LTLVLLFVTSLNF--------------ASAGVD------GDYWTYSGELDQ-KH-WAEKYHDCGG 46

  Fly    98 NNQSPINIDMNCVEINYFDTPLIWSHYNSIPLGIRLENNGH--------TLILRAAFPERTPSID 154
            ..||||:|....|..:.....|..:.|..|.....::||||        |:.:...||.:..:: 
Zfish    47 QQQSPIDIQRRKVRYSPRMQQLELTGYEDIRGSFLMKNNGHSVEIQLPSTMKITKGFPHQYTAV- 110

  Fly   155 GGDLLGRFDFREISFRW-SW-ASSLGSEHTLDHHHSPLEMQCLHTDGDGC----DGCSSSQGVLM 213
                       ::...| .| ..:.|||||:|......|:..:|.:.:..    :..:...|:.:
Zfish   111 -----------QMHLHWGGWDLEASGSEHTMDGIRYMAELHVVHYNSEKYPSFEEAKNKPDGLAV 164

  Fly   214 ISYMF-DLSEHNPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMSPFYDKFYSYNGSLTEPPCHRG 277
            :::.| |....|.:....|.:||.::..||.:.:....:..::|.....||.|.||||.|||...
Zfish   165 LAFFFEDGHFENTYYSDFISNLANIKYVGQSMSISNLNVLSMLSENLSHFYRYKGSLTTPPCFES 229

  Fly   278 AEWLIYPESLAISERQLNEFRQ-LRDRRGSRIARNARPVQPIGDRMV---YLNRYRTG 331
            ..|.::...:.:|..|:.:... |.|.....:..:.|..||:.:|:|   :|.|...|
Zfish   230 VMWTVFDTPITLSHNQIRKLESTLMDHDNKTLWNDYRMAQPLNERVVESTFLPRLSKG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 62/266 (23%)
ca6XP_009295179.1 alpha_CA 33..281 CDD:469577 61/261 (23%)
LamG 332..521 CDD:473984
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.