DRSC/TRiP Functional Genomics Resources

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Protein Alignment otp and Pitx2

DIOPT Version :9

Sequence 1:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001035970.1 Gene:Pitx2 / 54284 RGDID:3331 Length:324 Species:Rattus norvegicus


Alignment Length:331 Identity:86/331 - (25%)
Similarity:125/331 - (37%) Gaps:117/331 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 NNGNGNNNNSMQQQDQHLDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTES 158
            :.|....|..:..:|.. .|.:|:|.||.||..||.|||..|.:..|||:..|||||:...|||:
  Rat    71 DKGQQGKNEDVGAEDPS-KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 134

  Fly   159 RVQVWFQNRRAKWKKRKKTTNVFRTPGALLPSHGLPPFGANITNIAMGDGLCGTGMFGGDRWSVG 223
            ||:|||:||||||:||::....                           .||..|.  |.:::..
  Rat   135 RVRVWFKNRRAKWRKRERNQQA---------------------------ELCKNGF--GPQFNGL 170

  Fly   224 VNP---MTAGFGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQHYGLNALGDSMMYQHSVGGVS 285
            :.|   |..|:...|.::       .||.|     ::|...|:..:               ..::
  Rat   171 MQPYDDMYPGYSYNNWAA-------KGLTS-----ASLSTKSFPFF---------------NSMN 208

  Fly   286 CGPSGSPSATTPPN----MNSCSSVTPPPLSAQPNSSQNELN------------GEPMPLHQQQQ 334
            ..|..|.|..:|||    |:..||:.|..::..|.||.|.||            ..|.|.     
  Rat   209 VNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPA----- 268

  Fly   335 QQTHQHQQQQTHQHHPMAPPTPTQQQQQLPQSMQSPSDGANDTLHSI------------AALRRR 387
                          .|.|||||....:          |..|.:|.|:            |:::..
  Rat   269 --------------CPYAPPTPPYVYR----------DTCNSSLASLRLKAKQHSSFGYASVQNP 309

  Fly   388 ASELNA 393
            ||.|:|
  Rat   310 ASNLSA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otpNP_001286654.1 Homeobox 119..167 CDD:278475 26/47 (55%)
Pitx2NP_001035970.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..111 15/40 (38%)
Homeobox 96..149 CDD:395001 32/52 (62%)
OAR 282..299 CDD:397759 4/16 (25%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 286..299 2/12 (17%)
Nuclear localization signal. /evidence=ECO:0000255 292..296 0/3 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 100 1.000 Inparanoid score I4895
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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