DRSC/TRiP Functional Genomics Resources

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Protein Alignment otp and sv

DIOPT Version :9

Sequence 1:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:496 Identity:96/496 - (19%)
Similarity:159/496 - (32%) Gaps:170/496 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NNLGANVLGPKDCDLPKAALTALHAGVNSFGQLPVGPNLADLGGGAGGGGSSGGVPVGGGVARLH 67
            |::..||          :|..::||.:.:                  .|..|..|.||      |
  Fly   351 NSVNTNV----------SASASVHASIPT------------------SGTDSVQVSVG------H 381

  Fly    68 ISGGLCD----NSNALNGGNGSSGNG----------NGNNNNGNGNNNNSMQQQDQHLDKNKQKR 118
            |:....:    ||.|.....|.|.||          :.||||.:.||||:.:        :..||
  Fly   382 INANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNNTE--------SSCKR 438

  Fly   119 HRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRT 183
            .|.           ....:.|..:|....:...|             .|.:.:...:..||::..
  Fly   439 KRI-----------EAHDENHDTNIHSDNDDGKR-------------QRMSTYSGDQLYTNIWSG 479

  Fly   184 PGALLPSHGLPPFGANITNIAMGDGLCGTGMFGGDRWSVGVNPMTAGFGQL---NQSSPLSSSLN 245
            ...:...|.|.   |.:.|:....|.|....:.... .....|: :|.|..   |.:|.|..|:.
  Fly   480 KWCIKDDHKLL---AELGNLTASTGNCPATYYEASN-GFSTTPI-SGSGATASGNDTSMLYDSIT 539

  Fly   246 --SGLNSGI---NMGSALGAGSYQHYGLNALGDSMMYQHSVGGVSCGPSGSPSATTPP------- 298
              |...|.|   .:|.::|.||     |..|....|::..:...|.     ...|.||       
  Fly   540 TISQTQSSIYTPAIGPSIGTGS-----LTPLVPISMHEMKLSANSI-----QEQTVPPFYTALAF 594

  Fly   299 --------NMNSCSSVTPPPLSAQPNSSQN---------------ELNG----EPMPL------- 329
                    ::.:|||:........|.||.:               |.|.    ||:..       
  Fly   595 DGNYTSMTSLENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSED 659

  Fly   330 HQQQQQQTHQHQQQ----QTHQHHPMAPPTPTQQQQQL-----PQSM--QSPSDGANDTLHSIAA 383
            :.::.::::..|..    ..|.||.........::..|     |.|:  ..||.|:  :|.:|..
  Fly   660 NNKEPEKSNSSQSSDHIASPHLHHIGEEQLRGNRRSNLNASTHPSSLIPLQPSGGS--SLLNINP 722

  Fly   384 LRRRAS-ELN--------AIPSYLQMAPHNYEHYNSNSNSV 415
            ...|:. |||        :.|:.|.    ::.||::..:||
  Fly   723 SENRSDVELNLSNNVGLYSTPTVLP----SFNHYSAGCSSV 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otpNP_001286654.1 Homeobox 119..167 CDD:278475 4/47 (9%)
svNP_524633.3 PAX 175..299 CDD:128645
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450953
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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