DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otp and gsb

DIOPT Version :9

Sequence 1:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:335 Identity:100/335 - (29%)
Similarity:138/335 - (41%) Gaps:79/335 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ISGGLCDNSNALNGGN------GSSGNGNGNNNNG-NGNNNNSMQQQDQHLD--------KNKQK 117
            |..|:||..||.:..:      ||||:|..::.:| .|....|:..:|:..|        |.||:
  Fly   122 IEAGVCDKQNAPSVSSISRLLRGSSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQR 186

  Fly   118 RHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFR 182
            |.||.|:..|::.|||.|::|.|||::.|||:|...||||:||||||.||||:.:|:..|..|  
  Fly   187 RSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQV-- 249

  Fly   183 TPGALLPSHG--LPPFGANITNIAMGDGLCGTGMFGGDRW-SVGVNPMTAGF-GQLNQSSPLSSS 243
                  ||..  ...|||..|..|......|..::....| |.|.....|.: |.:...||.||:
  Fly   250 ------PSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASST 308

  Fly   244 LNSGLNSGIN----------------MGSALGAGSYQHYGLNALGDSMMY-----------QHSV 281
              ||.:|..:                |.|..|.||     .||...|..|           |...
  Fly   309 --SGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGS-----SNATYPSAAYSMPQTPATSAEQLRS 366

  Fly   282 GGVSCGPSGSPSATTPPNMNSCSSVTPPPLSAQPNSSQNELNGEPMPLHQQQQQQTHQHQQQQTH 346
            ...|...|||...:|..:.|...|..||     .:::.|.::|             :.||..|..
  Fly   367 QFASAAASGSHHPSTWDSYNFAGSFFPP-----ASAAGNHISG-------------YHHQVDQKS 413

  Fly   347 QHHPMAPPTP 356
            .....||..|
  Fly   414 SMMTTAPTYP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otpNP_001286654.1 Homeobox 119..167 CDD:278475 26/47 (55%)
gsbNP_523863.1 PAX 19..143 CDD:128645 6/20 (30%)
homeodomain 186..243 CDD:238039 31/56 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450943
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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