DRSC/TRiP Functional Genomics Resources

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Protein Alignment otp and unc-4

DIOPT Version :9

Sequence 1:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001285389.1 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster


Alignment Length:536 Identity:142/536 - (26%)
Similarity:183/536 - (34%) Gaps:186/536 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NLGANVLG--PKD--------CDLPKAAL--TA---LHA--------GVN--------SFGQLPV 37
            |.|.::||  |..        |.:|...|  ||   |:|        ||.        .||...|
  Fly    63 NAGQHLLGGSPSSACSTSVSGCGMPSEGLHPTAALQLYAAAAQLAPNGVRVPPWGPFLQFGVPGV 127

  Fly    38 -GPNLADLGGGAGGGGSSGGVPVGGGVARLHISGGLCDNSNALNGGNGSS--------------- 86
             |||...||.......|:||.|.....|.........:.|||.....|.|               
  Fly   128 FGPNGPFLGRPRFDAASAGGHPNSAAAAAAATQMAAVNASNAFANLTGLSAAALRNVSAAQTTAV 192

  Fly    87 ----------------GN----------GNGNNNN----GNGNNNNSMQQQDQHLDKNKQKRHRT 121
                            ||          ..|:|.:    |:|::::|..         |::|.||
  Fly   193 AAVASTVATIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGDDDSSAA---------KRRRSRT 248

  Fly   122 RFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRTPGA 186
            .|...||.||||.||.:|||||||||.:|||:.|.||||.|||||||||.:||:.|.   :.||.
  Fly   249 NFNSWQLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTK---KGPGR 310

  Fly   187 LLPSHG----------LPPFGANITNIA-----------------MGDGLC-------------- 210
              |:|.          :||........|                 ...|:.              
  Fly   311 --PAHNAQPQTCSGEPIPPNELKAKERARRRKKLAKAIDRQARKLQAKGITVDLEALKAEYISQH 373

  Fly   211 -GTGMFG-GDRWSVGVNPMTAG------FGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQHYG 267
             ..|.|. .|....|:.....|      .|..:..||:......|...|...|...||.|..|.|
  Fly   374 KANGTFSDSDLEDDGIQIDVVGGTDSDDEGDSDAVSPVRLGGGGGGGGGTGGGGGGGASSSLHCG 438

  Fly   268 LNALGDSMMYQHSVGGVSCGPSGSPSATTPPNMNSCSSV---TPPPLSAQPNSSQNELNGEPMPL 329
            |:..|||......:||  .|..||||:..||:|.|..:|   ...|:....:..::.....|.||
  Fly   439 LDGDGDSSRAGSFIGG--GGSLGSPSSVAPPSMLSNGAVQFGKLEPMDGNESEERDRERDSPKPL 501

  Fly   330 -------HQ---QQQQQ------------------THQHQQQQTHQHHPMA-------------P 353
                   ||   |..||                  .|||...|.|.||..|             .
  Fly   502 LFPAKAFHQLNLQSSQQHHGLVVGQGQGSGSGHGHGHQHNHHQHHLHHGSASASAAAAVANLVHQ 566

  Fly   354 PTPTQQQQQLPQSMQS 369
            .:|...::..|.|::|
  Fly   567 TSPISMRRSNPFSIES 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otpNP_001286654.1 Homeobox 119..167 CDD:278475 32/47 (68%)
unc-4NP_001285389.1 Homeobox 246..299 CDD:278475 37/52 (71%)
NK <327..>368 CDD:302627 3/40 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450911
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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