DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otp and Pitx3

DIOPT Version :9

Sequence 1:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_006526827.1 Gene:Pitx3 / 18742 MGIID:1100498 Length:388 Species:Mus musculus


Alignment Length:291 Identity:85/291 - (29%)
Similarity:120/291 - (41%) Gaps:81/291 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 KNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKT 177
            |.||:|.||.||..||.|||..|.:..|||:..|||||:...|||:||:|||:||||||:||:::
Mouse   145 KKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERS 209

  Fly   178 TNV------FRTP-GALLP---------SHG-------LPPFGANITNIAMGDGLCGTGMFGGDR 219
            ...      |..| |.|:|         |:|       .||..|.....|..             
Mouse   210 QQAELCKGGFAAPLGGLVPPYEEVYPGYSYGNWPPKALAPPLAAKTFPFAFN------------- 261

  Fly   220 WSVGVNPMTAGFGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQHYGLN----ALGDSMMYQHS 280
             ||.|.|:.:   |...|.|.|.:.:...::....|:..|.|:.|  ||.    .|..:.:   |
Mouse   262 -SVNVGPLAS---QPVFSPPSSIAASMVPSAAAAPGTVPGPGALQ--GLGGAPPGLAPAAV---S 317

  Fly   281 VGGVSCGPSGSPSATTPPNMNSCSSVTPPPLSAQP-NSSQNELNGEPMPLHQQQQQQTHQHQQQQ 344
            .|.||| |..|.:|.      :.::.:.|.:...| |||...|                   :.:
Mouse   318 SGAVSC-PYASAAAA------AAAAASSPYVYRDPCNSSLASL-------------------RLK 356

  Fly   345 THQH----HPMAP-PTPTQQQQQLPQSMQSP 370
            ..||    :|..| |.|.........:::.|
Mouse   357 AKQHASFSYPAVPGPPPAANLSPCQYAVERP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otpNP_001286654.1 Homeobox 119..167 CDD:278475 26/47 (55%)
Pitx3XP_006526827.1 Homeobox 152..205 CDD:365835 32/52 (62%)
PTZ00395 <228..>322 CDD:185594 24/115 (21%)
OAR 344..361 CDD:367680 6/35 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I5012
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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