DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otp and Pitx2

DIOPT Version :9

Sequence 1:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001035967.1 Gene:Pitx2 / 18741 MGIID:109340 Length:324 Species:Mus musculus


Alignment Length:331 Identity:86/331 - (25%)
Similarity:125/331 - (37%) Gaps:117/331 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 NNGNGNNNNSMQQQDQHLDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTES 158
            :.|....|..:..:|.. .|.:|:|.||.||..||.|||..|.:..|||:..|||||:...|||:
Mouse    71 DKGQQGKNEDVGAEDPS-KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 134

  Fly   159 RVQVWFQNRRAKWKKRKKTTNVFRTPGALLPSHGLPPFGANITNIAMGDGLCGTGMFGGDRWSVG 223
            ||:|||:||||||:||::....                           .||..|.  |.:::..
Mouse   135 RVRVWFKNRRAKWRKRERNQQA---------------------------ELCKNGF--GPQFNGL 170

  Fly   224 VNP---MTAGFGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQHYGLNALGDSMMYQHSVGGVS 285
            :.|   |..|:...|.::       .||.|     ::|...|:..:               ..::
Mouse   171 MQPYDDMYPGYSYNNWAA-------KGLTS-----ASLSTKSFPFF---------------NSMN 208

  Fly   286 CGPSGSPSATTPPN----MNSCSSVTPPPLSAQPNSSQNELN------------GEPMPLHQQQQ 334
            ..|..|.|..:|||    |:..||:.|..::..|.||.|.||            ..|.|.     
Mouse   209 VNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPA----- 268

  Fly   335 QQTHQHQQQQTHQHHPMAPPTPTQQQQQLPQSMQSPSDGANDTLHSI------------AALRRR 387
                          .|.|||||....:          |..|.:|.|:            |:::..
Mouse   269 --------------CPYAPPTPPYVYR----------DTCNSSLASLRLKAKQHSSFGYASVQNP 309

  Fly   388 ASELNA 393
            ||.|:|
Mouse   310 ASNLSA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otpNP_001286654.1 Homeobox 119..167 CDD:278475 26/47 (55%)
Pitx2NP_001035967.1 COG5576 40..>149 CDD:227863 38/78 (49%)
Homeobox 96..149 CDD:365835 32/52 (62%)
OAR 282..299 CDD:367680 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I5012
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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