DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and SOS3

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001190377.1 Gene:SOS3 / 832494 AraportID:AT5G24270 Length:222 Species:Arabidopsis thaliana


Alignment Length:176 Identity:46/176 - (26%)
Similarity:79/176 - (44%) Gaps:15/176 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YQD------CTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMPELRENPFRR 74
            |:|      .|.||.:|:..:::.|::|...::...:...:...:.:      .....|.|.|..
plant    19 YEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLAL------FRNRNRRNLFAD 77

  Fly    75 RICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHADLMSCLTTMTK 139
            ||.:.|.....|.:.|.:|:.:|.||...||...||.:|||:||..|.|||...:|...:..:..
plant    78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLH 142

  Fly   140 NE---LSPEEHQQIADKVIEEADVDGDGKLSILEFEHVILRAPDFL 182
            ..   ||.:..:.:.||...:||...|||:.|.|::..:...|..:
plant   143 ESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 43/162 (27%)
SOS3NP_001190377.1 FRQ1 29..187 CDD:227455 44/163 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.880

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