DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and AT3G03410

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_186991.1 Gene:AT3G03410 / 821262 AraportID:AT3G03410 Length:131 Species:Arabidopsis thaliana


Alignment Length:127 Identity:31/127 - (24%)
Similarity:53/127 - (41%) Gaps:26/127 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RRICEAFSRDGQGNLSFEDFLDALSVFSEQ-APRDIKVFYAFKIYDFDQDGFIGHADLMSCLTTM 137
            :|:.|.|.::..|.||.::|.:....||.. ...||..|  |:..|.|.:|.:...:..||:..|
plant     4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF--FEEIDVDGNGELNADEFTSCIEKM 66

  Fly   138 -----------------------TKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVIL 176
                                   |...|..:..::.:.:.:..|||||||.|:..||..:::
plant    67 LKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFMALVI 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 31/127 (24%)
AT3G03410NP_186991.1 PTZ00184 4..128 CDD:185504 31/125 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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