DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and Cib4

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_001068424.2 Gene:Cib4 / 688819 RGDID:1584147 Length:185 Species:Rattus norvegicus


Alignment Length:184 Identity:76/184 - (41%)
Similarity:107/184 - (58%) Gaps:22/184 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQ------MTEGQASSVKVPCECIEKMPELRE 69
            ::|::||..||.||.|||.:|..|.:|.|   |.:      :|..|.||          :|.||.
  Rat    12 EDLEEYQALTFLTRNEILCIHDTFLKLCP---PGKHYKEATLTMDQVSS----------LPALRV 63

  Fly    70 NPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHADLMSCL 134
            ||||.|||..||.|..  .||||.|...|||||||...:|:.|||:||||:::|||...||...:
  Rat    64 NPFRDRICRVFSHDDV--FSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLQKIV 126

  Fly   135 TTMTK-NELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVILRAPDFLSTFHI 187
            ..:.| :::|.:..|.:...|:.|:|:|.|..||..||||.:.::|||:::|.|
  Rat   127 LRLLKSDDVSEDLLQDVTHHVLSESDLDNDNMLSFSEFEHAMAKSPDFMNSFRI 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 23/62 (37%)
Cib4XP_001068424.2 EF-hand_7 101..168 CDD:463900 27/66 (41%)

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