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Protein Alignment Cib2 and Kcnip1
DIOPT Version :9
Sequence 1: | NP_611523.3 |
Gene: | Cib2 / 37363 |
FlyBaseID: | FBgn0034558 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006246167.1 |
Gene: | Kcnip1 / 65023 |
RGDID: | 70886 |
Length: | 245 |
Species: | Rattus norvegicus |
Alignment Length: | 177 |
Identity: | 41/177 - (23%) |
Similarity: | 78/177 - (44%) |
Gaps: | 22/177 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 VVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMPELRE 69
:|....:.|:..:..|.||::|:..:::.|:...|..|..:.|..|..: :..|....
Rat 60 MVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYA--------QFFPHGDA 116
Fly 70 NPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHA------ 128
:.:...:..||.....|::.||||:.|||:.......: |:.:.|.:||.::||:|...
Rat 117 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIV 180
Fly 129 ----DLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEF 171
|:|...|.....|.:|.:| .|...::.|.:.||.:::.||
Rat 181 KAIYDMMGKYTYPVLKEDTPRQH---VDVFFQKMDKNKDGIVTLDEF 224
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Cib2 | NP_611523.3 |
FRQ1 |
20..180 |
CDD:227455 |
39/162 (24%) |
Kcnip1 | XP_006246167.1 |
FRQ1 |
68..234 |
CDD:227455 |
40/169 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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