DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and Kcnip1

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_006246167.1 Gene:Kcnip1 / 65023 RGDID:70886 Length:245 Species:Rattus norvegicus


Alignment Length:177 Identity:41/177 - (23%)
Similarity:78/177 - (44%) Gaps:22/177 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMPELRE 69
            :|....:.|:..:..|.||::|:..:::.|:...|..|..:.|..|..:        :..|....
  Rat    60 MVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYA--------QFFPHGDA 116

  Fly    70 NPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHA------ 128
            :.:...:..||.....|::.||||:.|||:.......: |:.:.|.:||.::||:|...      
  Rat   117 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIV 180

  Fly   129 ----DLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEF 171
                |:|...|.....|.:|.:|   .|...::.|.:.||.:::.||
  Rat   181 KAIYDMMGKYTYPVLKEDTPRQH---VDVFFQKMDKNKDGIVTLDEF 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 39/162 (24%)
Kcnip1XP_006246167.1 FRQ1 68..234 CDD:227455 40/169 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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