DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and cib1

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001011480.1 Gene:cib1 / 496971 XenbaseID:XB-GENE-970951 Length:190 Species:Xenopus tropicalis


Alignment Length:195 Identity:79/195 - (40%)
Similarity:121/195 - (62%) Gaps:11/195 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMP 65
            |||.....::|.:::||:.|:.|::||:..:|||.|     |.::.......|:::|.|....:|
 Frog     1 MGNSSSHLSKQLINEYQELTYLTKQEIILAYKRFSE-----VAQKDNRSNIESLRIPKERFLNLP 60

  Fly    66 ELRENPFRRRICEAFSRDGQ--GNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHA 128
            ||:.|||..|||..||...|  |::|||||||.||.|||.|..::|..|||:|:|||.||.:..:
 Frog    61 ELKANPFNDRICTVFSTSEQEDGSMSFEDFLDMLSAFSESATLEVKSHYAFRIFDFDGDGALNES 125

  Fly   129 DLMSCLTTMT----KNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVILRAPDFLSTFHIRI 189
            ||...:..:|    ..:||..|.:|:...::||:|:|.||.::..||:|||.|:|||:|:|.|.:
 Frog   126 DLEHLVNKLTGDKDDTKLSNSEMRQLIANILEESDIDKDGTINHSEFQHVISRSPDFISSFKIML 190

  Fly   190  189
             Frog   191  190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 67/165 (41%)
cib1NP_001011480.1 FRQ1 20..181 CDD:227455 67/165 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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