DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and cib3

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001011260.1 Gene:cib3 / 496710 XenbaseID:XB-GENE-5787572 Length:207 Species:Xenopus tropicalis


Alignment Length:182 Identity:107/182 - (58%)
Similarity:135/182 - (74%) Gaps:2/182 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMP 65
            ||||...||.::||.||||||||||||||:..|:|:|.|.|||...|  ....||:|.|.|..||
 Frog     1 MGNKQTIFTAEQLDTYQDCTFFTRKEILRLFNRYRDLAPQLVPDDYT--NKPDVKIPYELIGSMP 63

  Fly    66 ELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHADL 130
            ||::||||:||.|.||.||.||::.:||||..||.||.||:|:|.|||||||||:.|.:|..:||
 Frog    64 ELKDNPFRQRIAEVFSEDGDGNMTLDDFLDMFSVLSEMAPKDLKAFYAFKIYDFNNDDYICKSDL 128

  Fly   131 MSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVILRAPDFL 182
            ...|..:|:|||:|||...:.:|||:|||||.|||||:.:|:|:|:||||||
 Frog   129 EKTLNKLTRNELTPEEVCLVCEKVIDEADVDNDGKLSLEDFQHMIVRAPDFL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 35/61 (57%)
cib3NP_001011260.1 EF-hand_7 107..173 CDD:463900 37/65 (57%)

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