DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cib2 and ppp3r1b

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001004553.1 Gene:ppp3r1b / 447814 ZFINID:ZDB-GENE-040912-18 Length:170 Species:Danio rerio


Alignment Length:175 Identity:62/175 - (35%)
Similarity:95/175 - (54%) Gaps:18/175 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMP 65
            |||:.....|.       |:.|...||.|:.|||::|..|           :|..:..|....:|
Zfish     1 MGNEASYPLEM-------CSHFDADEIKRLGKRFKKLDLD-----------NSGSLSVEEFMSLP 47

  Fly    66 ELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHADL 130
            ||::||..:|:.:.|..||.|.:.|::|::.:|.||.:..::.|:.:||:|||.|:||:|.:.:|
Zfish    48 ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 112

  Fly   131 MSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVI 175
            ...|..|..|.|...:.|||.||.|..||.||||::|..||..|:
Zfish   113 FQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 28/61 (46%)
ppp3r1bNP_001004553.1 FRQ1 20..157 CDD:444056 54/147 (37%)

Return to query results.
Submit another query.