DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and elm

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster


Alignment Length:182 Identity:59/182 - (32%)
Similarity:90/182 - (49%) Gaps:23/182 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVTF-TEQELDDYQDCTFFTRKEILRVHKRFREL-RPDLVPRQMTEGQASSVKVPCECIEK 63
            ||||...| ..:|:...|:.|.||..:|.|::.||..| |.|.       |..|.     |.:.:
  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDC-------GTLSR-----EDLMR 53

  Fly    64 MPELRENPFRRRICEA-FSRDGQGNLSFEDFLDALSVF--------SEQAPRDIKVFYAFKIYDF 119
            :|||..||...||..: |:......::|..|::.|:.|        |:...|:.|:.:|||:||.
  Fly    54 IPELAINPLCERIVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDL 118

  Fly   120 DQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEF 171
            |.||.|...:|:|.|..|....:|.::...||::.|.|||:...||:|..:|
  Fly   119 DDDGVISRDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDF 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 52/162 (32%)
elmNP_001262295.1 FRQ1 23..173 CDD:227455 51/160 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464103
Domainoid 1 1.000 52 1.000 Domainoid score I4251
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.850

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