DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and rcvrn2

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_956258.1 Gene:rcvrn2 / 335650 ZFINID:ZDB-GENE-030131-7590 Length:193 Species:Danio rerio


Alignment Length:204 Identity:38/204 - (18%)
Similarity:92/204 - (45%) Gaps:45/204 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGN-KVVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKM 64
            ||| |....:::.|:|.:..|.|:..|:.:.::.|::             |..|.::..|..:|:
Zfish     1 MGNAKSSAMSKEILEDLKLNTKFSENELSQWYENFQK-------------QCPSGRITPEEFKKI 52

  Fly    65 -----PELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGF 124
                 ||.....:.:.:..:|..:..|.|.|::::.||.:.| ....:.|:.:||.::|.|::|:
Zfish    53 YERFFPECDTTSYAQHVFRSFDTNDDGTLDFKEYIIALHMTS-TGKTERKLEWAFSLFDVDKNGY 116

  Fly   125 IGHADLMSCLTTMTK------------NELSPE-------------EHQQIADKVIEEADVDGDG 164
            |..:::......:.|            :|.:||             :::::|:....:..::.:.
Zfish   117 ITKSEVAEICQAIFKLIPKEDQESLPADENTPEKRADKLWSYFNKKDNERLAEGEFIQGILENED 181

  Fly   165 KLSILEFEH 173
            .:.:::|||
Zfish   182 AIHLIQFEH 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 32/184 (17%)
rcvrn2NP_956258.1 FRQ1 14..181 CDD:227455 31/180 (17%)
EF-hand_8 40..87 CDD:290545 9/46 (20%)
EFh 65..125 CDD:238008 14/60 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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