DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and chp1

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_956009.1 Gene:chp1 / 325361 ZFINID:ZDB-GENE-030131-4086 Length:194 Species:Danio rerio


Alignment Length:190 Identity:53/190 - (27%)
Similarity:95/190 - (50%) Gaps:26/190 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVT-FTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKM 64
            ||::..: ..|:::::.:..|.|:..:|.|::.||..|         .:|:...:.  .|..:::
Zfish     1 MGSRASSLLREEDIEEIKKETGFSHSQITRLYSRFHSL---------DKGENGGLS--REDFQRI 54

  Fly    65 PELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVF----SEQAPRDI----------KVFYAFK 115
            |||..||...||..||..:|:..::|..|:..|:.|    ..:..:|:          |:.:||:
Zfish    55 PELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPVEDNEKNKDLTGEPLNSRTNKLLFAFR 119

  Fly   116 IYDFDQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVI 175
            :||.|:|..|...:|:..|..|....:|.|:...|||:.|:|||.:||..:|..||..|:
Zfish   120 LYDLDRDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADTNGDMCISFNEFTKVL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 23/61 (38%)
chp1NP_956009.1 FRQ1 27..181 CDD:444056 48/164 (29%)
EFh 113..179 CDD:238008 25/65 (38%)

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