DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and chp1

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_956009.1 Gene:chp1 / 325361 ZFINID:ZDB-GENE-030131-4086 Length:194 Species:Danio rerio


Alignment Length:190 Identity:53/190 - (27%)
Similarity:95/190 - (50%) Gaps:26/190 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVT-FTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKM 64
            ||::..: ..|:::::.:..|.|:..:|.|::.||..|         .:|:...:.  .|..:::
Zfish     1 MGSRASSLLREEDIEEIKKETGFSHSQITRLYSRFHSL---------DKGENGGLS--REDFQRI 54

  Fly    65 PELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVF----SEQAPRDI----------KVFYAFK 115
            |||..||...||..||..:|:..::|..|:..|:.|    ..:..:|:          |:.:||:
Zfish    55 PELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPVEDNEKNKDLTGEPLNSRTNKLLFAFR 119

  Fly   116 IYDFDQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVI 175
            :||.|:|..|...:|:..|..|....:|.|:...|||:.|:|||.:||..:|..||..|:
Zfish   120 LYDLDRDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADTNGDMCISFNEFTKVL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 50/170 (29%)
chp1NP_956009.1 FRQ1 1..181 CDD:227455 53/190 (28%)
EFh 113..179 CDD:238008 25/65 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592174
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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