DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and Cgref1

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_620787.2 Gene:Cgref1 / 245918 RGDID:620801 Length:326 Species:Rattus norvegicus


Alignment Length:134 Identity:39/134 - (29%)
Similarity:57/134 - (42%) Gaps:34/134 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 EKMPELRENPFR------RRICEAFSRDGQGNLSFEDFLDALSVFS---EQAPRDIKVFYAFKIY 117
            |...:|..|||:      ||:              .|:|..|....   ||..|:..:.|.|.::
  Rat    78 EAQQQLTTNPFQPGPEQLRRL--------------RDYLKGLEKMEEDPEQMNREQVLLYLFALH 128

  Fly   118 DFDQDGFIGHADLMSCLTTMTKNELSP-EEHQQI------ADKVIEEADVDGDGKLSILEFEHVI 175
            ||||:|.:...:|:|.||.    .|:| ..|..|      .|.|:|..|:||||.::..|..:..
  Rat   129 DFDQNGQLDGLELLSMLTA----ALAPGAAHFPINPVILVVDMVLETQDLDGDGLMTPAELINFP 189

  Fly   176 LRAP 179
            ..||
  Rat   190 GEAP 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 23/68 (34%)
Cgref1NP_620787.2 EF-hand_7 118..181 CDD:463900 23/66 (35%)

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