DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and chpf-2

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_503830.2 Gene:chpf-2 / 186617 WormBaseID:WBGene00019108 Length:195 Species:Caenorhabditis elegans


Alignment Length:196 Identity:56/196 - (28%)
Similarity:89/196 - (45%) Gaps:45/196 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVT-FTEQELDDYQDCTFFTRKEILRVHKRFREL---------RPDLVPRQMTEGQASSVK 55
            |||...: .::.|:.:..|.|.|.:.:|||::.||..|         |.|.:             
 Worm     1 MGNSNSSILSDAEMREIMDETQFNKHQILRLYTRFASLDKNGQGYLSRDDFL------------- 52

  Fly    56 VPCECIEKMPELRENPFRRRICEAF----SRDG---QGNLSFEDFLDALSVFSEQA--------P 105
                   .:|||..||...||.:||    ..||   .|.|:|..|:..|:.|...:        .
 Worm    53 -------NVPELAVNPLGDRIIDAFFTLGDSDGDSKSGQLTFRQFVRILAHFQPISKVKDNALNS 110

  Fly   106 RDIKVFYAFKIYDFDQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILE 170
            |..|:.:|||:||.:::.:|...:....|.:|....::.::..:||||.:||||.|.|||:|..:
 Worm   111 RKDKLRFAFKMYDLNKNNYITREEFKVILNSMVGANITSDQLDKIADKTLEEADQDRDGKISFED 175

  Fly   171 F 171
            |
 Worm   176 F 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 22/61 (36%)
chpf-2NP_503830.2 FRQ1 26..182 CDD:444056 49/171 (29%)

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