DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cib2 and cnb-1

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001256318.1 Gene:cnb-1 / 179572 WormBaseID:WBGene00000554 Length:171 Species:Caenorhabditis elegans


Alignment Length:157 Identity:57/157 - (36%)
Similarity:86/157 - (54%) Gaps:11/157 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMPELRENPFRRRICEAFSRD 83
            |:.|...|:.|:.:||::|..|           .|..:..|....:|||::||..:|:.:.|..|
 Worm    12 CSNFDAYELRRLTRRFKKLDVD-----------GSGSLSVEEFMSLPELQQNPLVQRVIDIFDED 65

  Fly    84 GQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHADLMSCLTTMTKNELSPEEHQ 148
            |.|.:.|.:|:..:|.||.:..::.|:.:||:|||.|:||||.:.:|...|..|..|.|...:.|
 Worm    66 GNGEVDFREFIQGISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELFQVLKMMVGNNLKDSQLQ 130

  Fly   149 QIADKVIEEADVDGDGKLSILEFEHVI 175
            ||.||.|...|.|||||:|..||..|:
 Worm   131 QIVDKTILFHDKDGDGKISFQEFCDVV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 29/61 (48%)
cnb-1NP_001256318.1 FRQ1 21..159 CDD:444056 54/148 (36%)

Return to query results.
Submit another query.