DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cib2 and calm-1

DIOPT Version :10

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_492514.2 Gene:calm-1 / 172774 WormBaseID:WBGene00009260 Length:201 Species:Caenorhabditis elegans


Alignment Length:201 Identity:106/201 - (52%)
Similarity:141/201 - (70%) Gaps:12/201 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGN------------KVVTFTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASS 53
            |||            |...||.::||:||||||||||:|:|::|||..|.|..||..|...:.:.
 Worm     1 MGNNASSLSELNLFSKGGVFTREQLDEYQDCTFFTRKDIIRLYKRFYALNPHKVPTNMQGNRPAI 65

  Fly    54 VKVPCECIEKMPELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYD 118
            ..:..|.:||||||:||||:|||||.||.||:|||||:||||..|||||.||..:|:.|||:|||
 Worm    66 TTLTFEEVEKMPELKENPFKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPLQLKLKYAFRIYD 130

  Fly   119 FDQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVILRAPDFLS 183
            :|.|..:||.||...:.::|::|||..|.:.|.:::|||||:|||..::..|||||:.|:|||:.
 Worm   131 YDGDELLGHDDLSKMIRSLTRDELSDVEVEFIIERIIEEADLDGDSSINFAEFEHVVSRSPDFIR 195

  Fly   184 TFHIRI 189
            ||||||
 Worm   196 TFHIRI 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 EFh 109..171 CDD:238008 27/61 (44%)
calm-1NP_492514.2 PTZ00184 <76..183 CDD:185504 60/106 (57%)

Return to query results.
Submit another query.