DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and CHP1

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_009167.1 Gene:CHP1 / 11261 HGNCID:17433 Length:195 Species:Homo sapiens


Alignment Length:191 Identity:56/191 - (29%)
Similarity:96/191 - (50%) Gaps:27/191 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKVVT-FTEQELDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKM 64
            ||::..| ..::||::.:..|.|:..:|.|::.||..|         .:|:..::.  .|..:::
Human     1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSL---------DKGENGTLS--REDFQRI 54

  Fly    65 PELRENPFRRRICEAFSRDGQGNLSFEDFLDALSVF----SEQAPRDI-----------KVFYAF 114
            |||..||...||..||..:|:..::|..|:..|:.|    ..:..:|:           |:.:||
Human    55 PELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119

  Fly   115 KIYDFDQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEFEHVI 175
            ::||.|:|..|...:|:..|..|....:|.|:...|||:.|:|||.|||..:|..||..|:
Human   120 RLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 51/171 (30%)
CHP1NP_009167.1 FRQ1 1..182 CDD:227455 56/191 (29%)
Necessary for association with microtubule and interaction with GAPDH. /evidence=ECO:0000250 2..6 1/3 (33%)
Nuclear export signal 1. /evidence=ECO:0000250 138..147 2/8 (25%)
Necessary for nuclear export signal 143..185 16/38 (42%)
Nuclear export signal 2. /evidence=ECO:0000250 176..185 2/5 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156543
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.850

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