DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cib2 and kcnip3

DIOPT Version :9

Sequence 1:NP_611523.3 Gene:Cib2 / 37363 FlyBaseID:FBgn0034558 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_002932578.2 Gene:kcnip3 / 100494097 -ID:- Length:284 Species:Xenopus tropicalis


Alignment Length:169 Identity:43/169 - (25%)
Similarity:75/169 - (44%) Gaps:22/169 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LDDYQDCTFFTRKEILRVHKRFRELRPDLVPRQMTEGQASSVKVPCECIEKMPELRENPFRRRIC 77
            ||..|..|.||:||:..:::.|:...|..:..:.|.....|        :..|:.....:...:.
 Frog   107 LDQLQAVTKFTKKELQSLYRGFKNECPSGLVDEETFKLIYS--------QFFPQGDATMYAHFLF 163

  Fly    78 EAFSRDGQGNLSFEDFLDALSVFSEQAPRDIKVFYAFKIYDFDQDGFIGHA----------DLMS 132
            .||..|..|.:.||||:..||:.......: |:.:||.:||.::||:|...          |:|.
 Frog   164 NAFDMDRSGAIRFEDFVIGLSILLRGTIHE-KLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMG 227

  Fly   133 CLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEF 171
            ..|.....:.:|.||   .::..::.|.:.||.::|.||
 Frog   228 RYTYPLLRDDAPIEH---VERFFQKMDRNRDGVVTIDEF 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cib2NP_611523.3 FRQ1 20..180 CDD:227455 40/162 (25%)
kcnip3XP_002932578.2 FRQ1 114..273 CDD:227455 40/162 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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