DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNA1 and Kcna1

DIOPT Version :10

Sequence 1:NP_000208.2 Gene:KCNA1 / 3736 HGNCID:6218 Length:495 Species:Homo sapiens
Sequence 2:NP_034725.3 Gene:Kcna1 / 16485 MGIID:96654 Length:495 Species:Mus musculus


Alignment Length:495 Identity:487/495 - (98%)
Similarity:490/495 - (98%) Gaps:0/495 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTVMSGENVDEASAAPGHPQDGSYPRQADHDDHECCERVVINISGLRFETQLKTLAQFPNTLLGN 65
            ||||||||.||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse     1 MTVMSGENADEASTAPGHPQDGSYPRQADHDDHECCERVVINISGLRFETQLKTLAQFPNTLLGN 65

Human    66 PKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELGEEAMEKF 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 PKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELGEEAMEKF 130

Human   131 REDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILISIVIFCLETLPELKDD 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 REDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILISIVIFCLETLPELKDD 195

Human   196 KDFTGTVHRIDNTTVIYNSNIFTDPFFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIV 260
            ||||||:||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Mouse   196 KDFTGTIHRIDNTTVIYTSNIFTDPFFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIV 260

Human   261 AIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRE 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   261 AIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRE 325

Human   326 LGLLIFFLFIGVILFSSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGS 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 LGLLIFFLFIGVILFSSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGS 390

Human   391 LCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNLASDSDLSRRSSSTMSKSEYM 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||
Mouse   391 LCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNLASDSDLSRRSSSTISKSEYM 455

Human   456 EIEEDMNNSIAHYRQVNIRTANCTTANQNCVNKSKLLTDV 495
            |||||||||||||||.||||.|||||:|||||||||||||
Mouse   456 EIEEDMNNSIAHYRQANIRTGNCTTADQNCVNKSKLLTDV 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNA1NP_000208.2 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P10499 1..128 124/126 (98%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 26/28 (93%)
BTB_POZ 37..163 CDD:453885 125/125 (100%)
Ion_trans 166..418 CDD:459842 249/251 (99%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323 12/12 (100%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377 4/4 (100%)
PDZ-binding. /evidence=ECO:0000250 493..495 1/1 (100%)
Kcna1NP_034725.3 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P10499 1..128 124/126 (98%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 26/28 (93%)
BTB_POZ 37..163 CDD:453885 125/125 (100%)
Ion_trans 166..418 CDD:459842 249/251 (99%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323 12/12 (100%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377 4/4 (100%)
PDZ-binding. /evidence=ECO:0000250 493..495 1/1 (100%)

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