DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH14 and car1_predicted

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001072785.1 Gene:car1_predicted / 780246 -ID:- Length:258 Species:Xenopus tropicalis


Alignment Length:245 Identity:66/245 - (26%)
Similarity:97/245 - (39%) Gaps:32/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LAKQPSPITIPESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQLSGAELL 133
            |....|||.|............||.::|  |...|..:.|.|:...:......: ...||...|.
 Frog    12 LTHHQSPININTRTAKYNPSLKPLKFSY--DPKTAKRIVNVGHCFNVEFEDICD-KSVLSEGPLD 73

  Fly   134 GRYQFVEAIFKWGSLK---SEHSIGKHNFCLELQALHRCAQLNNNFEYLTLSYLFALSHV----- 190
            |.|:..:..|.|||..   |||:|..|.:..||..:|.     |:.:|  .|:..|..|.     
 Frog    74 GHYRLCQFHFHWGSSDRDGSEHNIDGHLYPAELHIVHW-----NSKKY--TSFAEAAKHPDGVAV 131

  Fly   191 ---------KNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLPT 246
                     .|..|:.:.::|..:...|.:.....|||..|| |....|::|.|:..........
 Frog   132 VGVFLKLGNTNPALQSIIENLDKVKTKGKACPFTEFHLNGLL-PEDLNYWTYMGSLTTKPYFECV 195

  Fly   247 TWLINRKISVVDSRQLSEFEALYGRNGNRN----CKNGREKQPLGNRNVY 292
            ||:|.::...|.|:||.:|..|...:.|.|    .:|.|..|||.:|.||
 Frog   196 TWIILQEAITVSSQQLEQFRRLQCTSENENPSFILENHRPVQPLDHRVVY 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 66/245 (27%)
car1_predictedNP_001072785.1 alpha_CA 16..247 CDD:381753 65/241 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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