DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH14 and XB5797209

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_002931952.3 Gene:XB5797209 / 779564 XenbaseID:XB-GENE-5797210 Length:323 Species:Xenopus tropicalis


Alignment Length:261 Identity:70/261 - (26%)
Similarity:106/261 - (40%) Gaps:64/261 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SPITIPESNMIKRQLKM------------PLHWTYYEDLPMATVLENNGNTVIMR-----IYTAN 121
            |||.| |.:.:||...:            |..|.          |.|:|::|::.     |.:..
 Frog    52 SPINI-ERSKVKRDSHLGGISFQGYDHATPGRWK----------LINDGHSVLLSLSGEVIQSHV 105

  Fly   122 NFMPQLSGAELLGRYQFVEAIFKWGSLK---SEHSIGKHNFCLELQALHRCAQLNNNFEYLT--- 180
            |    :|||.|...|:.::..|.|||..   |||.:....:.:||..:|    :|..::.:|   
 Frog   106 N----ISGAGLPNTYRALQFHFHWGSSTRDGSEHLMDGKQYPMELHIVH----MNAKYQSITEAK 162

  Fly   181 --------LSYLFALSHVKNEHLKQVTDHLKWISQPGSSIEL-PPFHLESLLQPFG--SGYFSYE 234
                    |.:.|.:|.:.|.....:...:|.:|..|..||| ..|.||.||.|..  |.|:.|:
 Frog   163 KDPQGLAVLGFFFTVSEIDNPSYNTLEAGMKNVSLKGEFIELDSTFPLEMLLPPHDKLSRYYRYQ 227

  Fly   235 G---TYDNGDVVLPTTWLINRKISVVDSRQLSEF--EALYGRNGNRNCK---NGREKQPLGNRNV 291
            |   |.|..:||:   |.:......:..:||...  .|.:..||....|   |.|..|||..|.|
 Frog   228 GSLTTPDCSEVVI---WTVFEDPISISQKQLKIMTETAHFTANGETLVKMSDNFRTPQPLKGRKV 289

  Fly   292 Y 292
            :
 Frog   290 W 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 70/261 (27%)
XB5797209XP_002931952.3 Carb_anhydrase 46..287 CDD:395141 68/256 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.