DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH14 and Car12

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_006511611.1 Gene:Car12 / 76459 MGIID:1923709 Length:355 Species:Mus musculus


Alignment Length:244 Identity:59/244 - (24%)
Similarity:97/244 - (39%) Gaps:33/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SPITIPESNMIKRQLKM-PLHWTYYE-DLPMATVLENNGNTVIMRIYT---ANNFMPQLSGAELL 133
            |||.: .|::::....: ||.:..|. .:.....|.|:|::|.:.:.:   .....|....||.|
Mouse    56 SPIDL-HSDILQYDASLAPLQFQGYNVSVEKLLNLTNDGHSVRLNLNSDMYIQGLQPHHYRAEQL 119

  Fly   134 GRYQFVEAIFKWGSLK----SEHSI-GKHNFCLELQALHRCAQLNNNFEYLT-----LSYLFALS 188
            ..:        ||:..    |||:: ||| |..||..:|..:.|..:|...:     |:.|..|.
Mouse   120 HLH--------WGNRNDPHGSEHTVSGKH-FAAELHIVHYNSDLYPDFSTASDKSEGLAVLAVLI 175

  Fly   189 HV--KNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLPTTWLIN 251
            .:  .|....::..||:.:...|..:.:|.|::|.||......|:.|||:...........|.:.
Mouse   176 EIGSANPSYDKIFSHLQHVKYKGQQVLIPGFNIEELLPESPGEYYRYEGSLTTPPCYPTVLWTVF 240

  Fly   252 RKISVVDSRQLSEFE-ALY-----GRNGNRNCKNGREKQPLGNRNVYFN 294
            |....:...||...| |||     .........|.|:.|....|.||.:
Mouse   241 RNPVQISQEQLLALETALYFTHMDDPTPREMINNFRQVQKFDERLVYIS 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 58/241 (24%)
Car12XP_006511611.1 alpha_CA 39..290 CDD:381753 59/244 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835816
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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