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Protein Alignment CAH14 and Car13

DIOPT Version :9

Sequence 1:	NP_611519.2	Gene:	CAH14 / 37359	FlyBaseID:	FBgn0034554	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	NP_078771.1	Gene:	Car13 / 71934	MGIID:	1931322	Length:	262	Species:	Mus musculus

Alignment Length:	234	Identity:	58/234 - (24%)
Similarity:	94/234 - (40%)	Gaps:	18/234 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    72 QPSPITIPESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQLSGAELLGRY 136
            |.|||.|....:.......||...|  |...|.::.|:|::..:. :........|.|..|.|.|
Mouse    28 QQSPIEIKTKEVKYDSSLRPLSIKY--DPASAKIISNSGHSFNVD-FDDTEDKSVLRGGPLTGNY 89

  Fly   137 QFVEAIFKWGSLK---SEHSIGKHNFCLELQALHRCAQLNNNF-------EYLTLSYLFALSHVK 191
            :..:....|||..   |||.:....:..||..:|..:....:|       :.|.:..:|......
Mouse    90 RLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVHWNSDKYPSFVEAAHESDGLAVLGVFLQIGEH 154

  Fly   192 NEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLPTTWLINRKISV 256
            |..|:::||.|..|.:.|.......|....|| |....|::|.|:.....::...||::.::...
Mouse   155 NPQLQKITDILDSIKEKGKQTRFTNFDPLCLL-PSSWDYWTYPGSLTVPPLLESVTWIVLKQPIS 218

  Fly   257 VDSRQLSEFEALY----GRNGNRNCKNGREKQPLGNRNV 291
            :.|:||:.|.:|.    |.:......|.|..|||..|.|
Mouse   219 ISSQQLARFRSLLCTAEGESAAFLLSNHRPPQPLKGRRV 257

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.