DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH14 and PTPRG

DIOPT Version :10

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_016862450.1 Gene:PTPRG / 5793 HGNCID:9671 Length:1485 Species:Homo sapiens


Alignment Length:263 Identity:54/263 - (20%)
Similarity:87/263 - (33%) Gaps:72/263 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 YEDLPM---------ATVLENNGNTVIMRIYTANNFMPQLSGAELLGRYQFVEAIFKW----GSL 148
            |::|.:         .|.::|.|.||  .|...:::.  :|||.|.||::..:..|.|    ||.
Human    99 YQELQLDGFDNESSNKTWMKNTGKTV--AILLKDDYF--VSGAGLPGRFKAEKVEFHWGHSNGSA 159

  Fly   149 KSEHSIGKHNFCLELQALHR---CAQLNNNFEYLTL----------------------------- 181
            .|||||....|.:|.:....   ...|:....::.|                             
Human   160 GSEHSINGRRFPVEAEDARGGDIMLMLSQGMRFILLGLKKEQFEERKSWTTYQSMQIFFYNPDDF 224

  Fly   182 ----------------SYLFALSHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGY 230
                            :..|.:|...|..|..:...||.:........|.||.|..||......|
Human   225 DSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSY 289

  Fly   231 FSYEGTYDNGDVVLPTTWLINRKISVVDSRQLSEFEALYGRNGNRNCK-------NGREKQPLGN 288
            :.|.|:...........|::.|:...:...||..|.:::......:.|       |.|.:|.|.:
Human   290 YRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHD 354

  Fly   289 RNV 291
            |.|
Human   355 RVV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 54/263 (21%)
PTPRGXP_016862450.1 alpha_CARP_receptor_like 67..359 CDD:239396 54/263 (21%)
FN3 388..478 CDD:238020
PHA03169 <584..>742 CDD:223003
R-PTPc-G-1 888..1161 CDD:350505
R-PTP-G-2 1245..1449 CDD:350508
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.