DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH14 and ca10b

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_005164153.1 Gene:ca10b / 568543 ZFINID:ZDB-GENE-080815-2 Length:326 Species:Danio rerio


Alignment Length:320 Identity:68/320 - (21%)
Similarity:114/320 - (35%) Gaps:73/320 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FIMMLISCTMAVAFI------LNLYSGRTIFQDV--------------VNAVGNRRLEMKLAKQP 73
            |:::|   .:.|.|:      ..|:.|...::||              ||...|.   ..:.|:.
Zfish     7 FVLIL---NINVIFVEAQPVSSKLHDGWWAYKDVVQGSFIPVPSFWGLVNTAWNL---CAIGKRQ 65

  Fly    74 SPITIPESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQLSGAELLGRYQF 138
            ||:.|..|.||......||.....:.....| :.|.|..|.:|  ...:.:..:||..|...|:.
Zfish    66 SPVNIETSRMIFDPFLNPLRLNAGQRKVSGT-MYNTGRHVSLR--PDKSHLVNISGGPLSYSYRL 127

  Fly   139 VEAIFKWGS---LKSEHSIGKHNFCLELQALHRCAQLNNNFE--------YLTLSYLFALSHVKN 192
            .|....:||   ..|||.:....|..|:|.:|....|..|:.        ...:|....:|...|
Zfish   128 EEIRLHFGSEDNRGSEHLLNGQAFPGEVQLIHYNQDLYLNYSDAVRSPNGIAVVSIFMKISEPTN 192

  Fly   193 EHLKQVTDH--LKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLPTTWLINRK-- 253
            ..|.::.:.  :..|:....:..|...::|. |.|..|.:.:|||:......:...||::..|  
Zfish   193 VFLNRMLNRETVTRITYKHDAYLLMGLNIEE-LYPETSRFITYEGSITIPPCLETATWILMNKPI 256

  Fly   254 ----ISVVDSRQLSE----------------FEALYGR--------NGNRNCKNGREKQP 285
                |.:...|.||:                .:.|:.|        :..|:|.|.|..:|
Zfish   257 YISQIEMQSLRLLSQNQPSQIFLSMGDNMRPTQTLHQRCIRTNINFSQRRDCPNNRMLRP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 57/260 (22%)
ca10bXP_005164153.1 PLN02179 7..257 CDD:177835 57/259 (22%)
alpha_CARP_X_XI_like 45..301 CDD:239395 55/262 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579210
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.