DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH14 and Ca9

DIOPT Version :10

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001101426.1 Gene:Ca9 / 313495 RGDID:1306426 Length:437 Species:Rattus norvegicus


Alignment Length:262 Identity:70/262 - (26%)
Similarity:109/262 - (41%) Gaps:35/262 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 YSGRTIFQDVVNAVGNRRLEMKLAKQPSPITIP-ESNMIKRQLKMPLHWTYYE--DLPMATVLEN 108
            |.|..::..|..|...|        ..||:.|. |.....|.|: ||....||  .||..: |.|
  Rat   122 YGGTLLWPQVSPACAGR--------FQSPVDIRLELTSFCRTLQ-PLELLGYELQSLPELS-LCN 176

  Fly   109 NGNTVIMRIYTANNFMPQLSGAELLG---RYQFVEAIFKWGSLK---SEHSIGKHNFCLELQALH 167
            ||:||.:.:      .|.|.  .:||   .|:.::....||:..   |||::..|.|..|:..:|
  Rat   177 NGHTVQLTL------PPGLK--MVLGPGQEYRALQLHLHWGTSDHPGSEHTVNGHRFPAEIHVVH 233

  Fly   168 RCAQLNNNFEYL-------TLSYLFALSHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQP 225
            .....:...|.|       .|:.....|..:|...:|:..||:.|::.||.||:|...:.:||..
  Rat   234 LSTAFSELHEALGRPGGLAVLAAFLQESPEENSAYEQLLSHLEEIAEEGSKIEIPGLDVSALLPS 298

  Fly   226 FGSGYFSYEGTYDNGDVVLPTTWLINRKISVVDSRQLSEFE-ALYGRNGNRNCKNGREKQPLGNR 289
            ..|.|:.|||:...........|.:..:...:.::||.... :|:|...:|...|.|..|||..|
  Rat   299 DLSRYYRYEGSLTTPPCSQGVIWTVFNETVKLSAKQLHTLSVSLWGLRDSRLQLNFRATQPLNGR 363

  Fly   290 NV 291
            .:
  Rat   364 TI 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 65/240 (27%)
Ca9NP_001101426.1 alpha_CA 128..370 CDD:469577 68/256 (27%)

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