back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CAH14 and cahz

DIOPT Version :9

Sequence 1:	NP_611519.2	Gene:	CAH14 / 37359	FlyBaseID:	FBgn0034554	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	NP_571185.1	Gene:	cahz / 30331	ZFINID:	ZDB-GENE-980526-39	Length:	260	Species:	Danio rerio

Alignment Length:	242	Identity:	64/242 - (26%)
Similarity:	103/242 - (42%)	Gaps:	27/242 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    69 LAKQP--SPITI----PESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQL 127
            :|..|  |||.|    .:.:...:.||:.     |:.....::| |||::..:.....:| ...|
Zfish    22 IANGPRQSPIDIVPTQAQHDPSLKHLKLK-----YDPATTKSIL-NNGHSFQVDFVDDDN-SSTL 79

  Fly   128 SGAELLGRYQFVEAIFKWGSLK---SEHSIGKHNFCLELQALHRCAQLNNNFEY------LTLSY 183
            :|..:.|.|:..:..|.|||..   |||:|....|..||..:|...:..|..|.      |.:..
Zfish    80 AGGPITGIYRLRQFHFHWGSSDDKGSEHTIAGTKFPCELHLVHWNTKYPNFGEAASKPDGLAVVG 144

  Fly   184 LFALSHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLPTTW 248
            :|......|..|::|.|.|..|...|.......|..::|| |....|::|||:.....::...||
Zfish   145 VFLKIGAANPRLQKVLDALDDIKSKGRQTTFANFDPKTLL-PASLDYWTYEGSLTTPPLLESVTW 208

  Fly   249 LINRKISVVDSRQLSEFEA-LYGRNGNRNC---KNGREKQPLGNRNV 291
            ::.::...|...|:::|.: |:...|...|   .|.|..|||..|.|
Zfish   209 IVLKEPISVSPAQMAKFRSLLFSSEGETPCCMVDNYRPPQPLKGRKV 255

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.