DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH14 and Car6

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_033932.2 Gene:Car6 / 12353 MGIID:1333786 Length:317 Species:Mus musculus


Alignment Length:245 Identity:59/245 - (24%)
Similarity:94/245 - (38%) Gaps:33/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KQPSPITI-PESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQLSGAELLG 134
            ::.|||.: .|..|....|| ||....||...:...:.|||:||.:.: ..:.::....|.|.:.
Mouse    44 ERQSPIDVKTEEVMFNPSLK-PLSLVNYEKENLEFTMTNNGHTVSIDL-PPSMYLETSDGTEFIS 106

  Fly   135 RYQFVEAIFKWGSLK-----SEHSIGKHNFCLELQALHRCAQLNNNFEYLT-------------L 181
            :    ...|.||...     |||:|......:|...:|      .|.||.|             |
Mouse   107 K----AFHFHWGGRDWELSGSEHTIDGIRSIMEAHFVH------FNKEYGTYENAKDQKNGLAVL 161

  Fly   182 SYLFAL-SHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLP 245
            :.||.: .:.:|.:...:...||.|.:||.:..|....:.:||......|::|.|:.........
Mouse   162 AVLFKIDEYAENTYYSDIISALKNIEKPGETTTLKDTTIRNLLPKDVHHYYTYPGSLTTPPCTEN 226

  Fly   246 TTWLINRKISVVDSRQLSEFEALYGRNGNRNCKNG-REKQPLGNRNVYFN 294
            ..|.:.|....:...|:...|.....:.|...:|| |..||..:|.|..|
Mouse   227 VQWFVLRDKVTLSKAQVVTIENSVMDHNNNTIQNGYRSTQPNNHRVVEAN 276

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 58/242 (24%)
Car6NP_033932.2 alpha_CA_VI 30..278 CDD:239399 59/245 (24%)