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Protein Alignment CAH14 and Car5a

DIOPT Version :9

Sequence 1:	NP_611519.2	Gene:	CAH14 / 37359	FlyBaseID:	FBgn0034554	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	NP_031634.2	Gene:	Car5a / 12352	MGIID:	101946	Length:	299	Species:	Mus musculus

Alignment Length:	251	Identity:	59/251 - (23%)
Similarity:	100/251 - (39%)	Gaps:	29/251 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    56 VVNAVGNRRLEMKLAKQPSPITIPESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTA 120
            |.:|.|.|:         |||.|...:.:......||..:|  |......|.|.|  ...::...
Mouse    50 VSSAEGTRQ---------SPINIQWKDSVYDPQLAPLRVSY--DAASCRYLWNTG--YFFQVEFD 101

  Fly   121 NNFMPQ-LSGAELLGRYQFVEAIFKWGSLK---SEHSIGKHNFCLELQALHRCAQLNNNFEY--- 178
            ::.... :||..|...|:..:..|.||:..   |||::..|.:..||..:|..:....|::.
Mouse   102 DSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASV 166

  Fly   179 ----LTLSYLFALSHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDN 239
                |.:..:|......::.|:::.|.|..:....:.:.:.||. .|.|.|....|::|.|:...
Mouse   167 GENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFD-PSCLLPACRDYWTYPGSLTT 230

  Fly   240 GDVVLPTTWLINRKISVVDSRQLSEFEALY--GRNGNRN--CKNGREKQPLGNRNV 291
            ..:....||::.:....|...|||.|..|.  ||....:  ..|.|..|||.:|.:
Mouse   231 PPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKL 286

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.