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Protein Alignment CAH14 and Car2

DIOPT Version :9

Sequence 1:	NP_611519.2	Gene:	CAH14 / 37359	FlyBaseID:	FBgn0034554	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	NP_001344263.1	Gene:	Car2 / 12349	MGIID:	88269	Length:	260	Species:	Mus musculus

Alignment Length:	257	Identity:	63/257 - (24%)
Similarity:	103/257 - (40%)	Gaps:	38/257 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    54 QDVVNAVGNRRLEMKLAKQPSPITIPESNMIKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIY 118
            :|...|.|:|:         ||:.|..:.........||..:|  |...:..:.|||::..:. :
Mouse    18 KDFPIANGDRQ---------SPVDIDTATAQHDPALQPLLISY--DKAASKSIVNNGHSFNVE-F 70

  Fly   119 TANNFMPQLSGAELLGRYQFVEAIFKWGSLK---SEHSIGKHNFCLELQALHRCAQLNNNFEY-- 178
            ..:.....|.|..|...|:.::..|.|||..   |||::.|..:..||..:|.      |.:|
Mouse    71 DDSQDNAVLKGGPLSDSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELHLVHW------NTKYGD 129

  Fly   179 ----------LTLSYLFALSHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSY 233
                      |.:..:|......::.|::|.:.|..|...|.......|...||| |....|::|
Mouse   130 FGKAVQQPDGLAVLGIFLKIGPASQGLQKVLEALHSIKTKGKRAAFANFDPCSLL-PGNLDYWTY 193

  Fly   234 EGTYDNGDVVLPTTWLINRKISVVDSRQLSEFEAL-YGRNGNRN---CKNGREKQPLGNRNV 291
            .|:.....::...||::.|:...|.|.|:|.|..| :...|:..   ..|.|..|||.||.:
Mouse   194 PGSLTTPPLLECVTWIVLREPITVSSEQMSHFRTLNFNEEGDAEEAMVDNWRPAQPLKNRKI 255

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.