DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH14 and ca1

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_002939198.1 Gene:ca1 / 100496485 XenbaseID:XB-GENE-957160 Length:262 Species:Xenopus tropicalis


Alignment Length:174 Identity:42/174 - (24%)
Similarity:73/174 - (41%) Gaps:15/174 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LLGRYQFVEAIFKWGS---LKSEHSIGKHNFCLELQALH-------RCAQLNNNFEYLTLSYLFA 186
            |...|:..:..|.||:   ..|||::....:..||..:|       ..|:.:.|.:...:..:|.
 Frog    85 LKATYRLNQFHFHWGASNDFGSEHTVDGKGYAAELHLVHWNSDKYSSFAEASKNPDGCAVVTVFI 149

  Fly   187 LSHVKNEHLKQVTDHLKWISQPGSSIELPPFHLESLLQPFGSGYFSYEGTYDNGDVVLPTTWLIN 251
            .....:..|::|.:.|:.|:..|.......|...:|| |....|::|:|:..:..::...||:|.
 Frog   150 KVGSSHPGLQRVVEALELIAAKGKQAAFTNFDASTLL-PASMDYWTYQGSLTHPPLLECVTWIIF 213

  Fly   252 RKISVVDSRQLSEF-EALYGRNGNRNC---KNGREKQPLGNRNV 291
            ::.....|.|::.| ..|....|...|   .|.|..|||..|.|
 Frog   214 KEPISASSEQINLFRRILSSAEGEEACPVLANHRPTQPLKGREV 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 42/174 (24%)
ca1XP_002939198.1 alpha_CA 2..261 CDD:381753 42/174 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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