DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH14 and ca4.2

DIOPT Version :9

Sequence 1:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_002933882.2 Gene:ca4.2 / 100489625 XenbaseID:XB-GENE-5952677 Length:302 Species:Xenopus tropicalis


Alignment Length:302 Identity:62/302 - (20%)
Similarity:99/302 - (32%) Gaps:74/302 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MAVAFILNLYSGRTIFQDVVNAVGNRRLEMK------------------LAK-QPSPITIPESNM 83
            |...|.|.|....::.:|...|.|:...|::                  .|| ..|||.:.....
 Frog     1 MMKCFSLALLVSLSLIKDSAAAEGDWCYEIQGHQTLGCGPRFWGEHYPTCAKNHQSPINVLTKKA 65

  Fly    84 IKRQLKMPLHWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQLSGAELLGRYQFVEAIFKWGS- 147
            :..:...|.|:..|........:.|||::..:.:.|.    .::||..|...|...:..|.||| 
 Frog    66 VFDKALKPFHFKGYNITGRHLNITNNGHSAQVDLPTG----IEISGGGLSETYIAAQFHFHWGSD 126

  Fly   148 --LKSEHSIGKHNFCLELQALHRCAQLNNNFEYLTLSYLFALSHVKNEHLKQVTDHLKWISQPGS 210
              ..|||::....:.:||..:|:.......|..|.:...|.....||.     |::         
 Frog   127 EFYGSEHTVDGEKYPMELHIVHKRKTSTGGFGDLAVLGFFYEETAKNN-----TEY--------- 177

  Fly   211 SIELPPFHLESLLQPFG-----SGYFSYEGTYD--------------NGDVVLP-----TTWLIN 251
                     .||::..|     .||.::..|.|              ||.:..|     ..|.:.
 Frog   178 ---------NSLIESLGHISTKDGYKNFSATLDKLIPINELKVYYRYNGSLTTPPCNETVIWTLF 233

  Fly   252 RKISVVDSRQLSEF-EALYGRNGNRNCKNGREKQPLGNRNVY 292
            .....:...||..| .:|......|..:|.|..|...:|.||
 Frog   234 NTTIKLSKLQLQAFHNSLNFTEKQRMVENFRPVQKRSDRIVY 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 54/253 (21%)
ca4.2XP_002933882.2 alpha_CA_IV_XV_like 52..275 CDD:239391 51/249 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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