DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and CMR2

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_014736.1 Gene:CMR2 / 854260 SGDID:S000005619 Length:1648 Species:Saccharomyces cerevisiae


Alignment Length:604 Identity:121/604 - (20%)
Similarity:217/604 - (35%) Gaps:215/604 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SFEKIWSGPKDK--------EYYGPDMTLGE-----VALIILRLYSDKVMQVYDPTGEELTGSQL 59
            ||.||.:|...|        ::..|.:.:.|     ||:|:..||.: ::.:..|:.:|   |.:
Yeast  1026 SFGKIVAGFLKKIVGSKIPLKHGDPIIIMCENSVEYVAMIMACLYCN-LLVIPLPSVKE---SVI 1086

  Fly    60 LEQSRRLAHAFQRLKLQRGDVVGISAKNTTYLTEVVIAALLNGTPINPLHPDFDAETTAYMFEIT 124
            .|..:.|.:..|..|::|   |.:.||         :.:|||..  |.::..|.      .::..
Yeast  1087 EEDLKGLVNIIQSYKVKR---VFVDAK---------LHSLLNDN--NVVNKCFK------KYKSL 1131

  Fly   125 KPKV-IFCDL--DNYQTLSAVKSSLKFKTEIILLTGTLPGVRNIQDLLADGCTGYDEKTLFACPH 186
            .||: :|..:  .|..|:|..|:.||.|      .|..||.|       .|.|          |.
Yeast  1132 IPKITVFSKVKTKNALTVSMFKNVLKQK------FGAKPGTR-------IGMT----------PC 1173

  Fly   187 LCGDDTAFIITSSGVTGLPKGVTRSHRSLLNSAKIPQ----------LFT----SDTVLFCFSPL 237
            :...:|.:.:||:      ..||.:|.||||::||.:          ||:    :..:.|.||.|
Yeast  1174 VVWVNTEYDVTSN------IHVTMTHSSLLNASKIVKETLQLRNNSPLFSICSHTSGLGFMFSCL 1232

  Fly   238 YWI-----SCIFTLLASLVNGCRRIITNRPFSVAYFADLVERHQVSFVLTVPHHMALL------- 290
            ..|     :|:|:|...|.:....:|..:..:|   .||..:.:..:.| :....:|:       
Yeast  1233 LGIYTGASTCLFSLTDVLTDPKEFLIGLQNLNV---KDLYLKLETLYAL-LDRASSLIEGFKNKK 1293

  Fly   291 -----AKS---------------------PERQEL-----------AAKMQCVQ-SFVCSGSKVP 317
                 ||:                     |.|..:           ...:.|.| |:|......|
Yeast  1294 ENINSAKNNTSGSLREDVFKGVRNIMIPFPNRPRIYTIENILKRYSTISLSCTQISYVYQHHFNP 1358

  Fly   318 MGIWRQLYELLGANRFAVLYGLTETGGISKNVGGPLGSEGRLLRNVQ----------VRVVDPHG 372
            :...|...::...:.:...:.|.|  ||.:.|.....|.|..:: :|          |.||:|  
Yeast  1359 LISLRSYLDIPPVDLYLDPFSLRE--GIIREVNPNDVSAGNYIK-IQDSGVVPVCTDVSVVNP-- 1418

  Fly   373 QSLGP---NQTGQILVRLNLRW-----------------GGYYHNP---------QETQVTVTPD 408
            ::|.|   .:.|:|       |                 ...|.:|         .:::|..|. 
Yeast  1419 ETLLPCVDGEFGEI-------WCCSEANAFDYFVCNSSKNKLYKDPFITEQFKSKMKSEVNNTL- 1475

  Fly   409 GKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFPIYPKQIEDVILHLPGVHE-VAVFGIP----- 467
             .:|.|||.|:..:..|.:.|.   :|...|           ::..|..:|| :.:.|:.     
Yeast  1476 -SYLRTGDLGFIKNVSCTNSQG---EVVNLN-----------LLFVLGSIHESIEILGLTHFVSD 1525

  Fly   468 -----DEVSTNLTACAVVR 481
                 .:|.:::.:|.:.:
Yeast  1526 LERTVKDVHSDIGSCLIAK 1544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 115/583 (20%)
AFD_class_I 45..528 CDD:302604 108/554 (19%)
CMR2NP_014736.1 DMAP_binding 5..121 CDD:368923
AFD_class_I 179..893 CDD:418409
Dip2 1004..1626 CDD:341231 121/604 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.