DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and AT1G20480

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_173472.1 Gene:AT1G20480 / 838636 AraportID:AT1G20480 Length:565 Species:Arabidopsis thaliana


Alignment Length:550 Identity:135/550 - (24%)
Similarity:237/550 - (43%) Gaps:64/550 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PDMTLGEVALIILRLYSDKVMQVYDPTGEELTGSQLLEQSRRLAHAFQRLKLQRGDVVGISAKNT 88
            |:..|...:.|..:.:..|.:.|...||..|:..:|.....|:|.....|.:::|:||.|.:.|:
plant    45 PNQFLDVTSFIASQPHRGKTVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNS 109

  Fly    89 TYLTEVVIAALLNGTPINPLHPDFDAETTAYMFEITKPKVIF--CDLDNYQTLSAVKSSLKFKTE 151
            .....|.::.:..|..|...:|...::..:.....::|.:.|  |.|     :|.:.::..|...
plant   110 ILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKL-----VSKLAAASNFNLP 169

  Fly   152 IIL----------------LTGTL-------PGVRNIQDLLADGCTGYDEKTLFACPHLCGDDTA 193
            ::|                |.|.|       |....::..:..                  ||||
plant   170 VVLMDDYHVPSQSYGDRVKLVGRLETMIETEPSESRVKQRVNQ------------------DDTA 216

  Fly   194 FIITSSGVTGLPKGVTRSHRSLLNSAKIPQL-FTSDTVLFCFSPLYWISCIFTLLASLVNGCRRI 257
            .::.|||.||..|||..|||:|:...:..:. |..:....|..|:..|.........|:.....|
plant   217 ALLYSSGTTGTSKGVMLSHRNLIALVQAYRARFGLEQRTICTIPMCHIFGFGGFATGLIALGWTI 281

  Fly   258 ITNRPFSVAYFADLVERHQVSFVLTVPHHMALLAKSPERQELAAKMQCVQSFVCSGSKVPMGIWR 322
            :....|.:|.....||.|:.|::..||..:..:............:..:.:.|..|:.:...:..
plant   282 VVLPKFDMAKLLSAVETHRSSYLSLVPPIVVAMVNGANEINSKYDLSSLHTVVAGGAPLSREVTE 346

  Fly   323 QLYELLGANRFAVLYGLTETGGI-----SKNVGGPLGSEGRLLRNVQVRVVDPH-GQSLGPNQTG 381
            :..|.....:....|||||:..|     :|......|:.|.|..||:.::|||. |:.||.||||
plant   347 KFVENYPKVKILQGYGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQTG 411

  Fly   382 QILVRLNLRWGGYYHNPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFPIYPK 446
            ::.:|......||:.|.:.|..|:..:| ||.|||..|.|.:|.:....|..::.|.|.:.:.|.
plant   412 ELWIRSPTVMKGYFKNKEATASTIDSEG-WLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPA 475

  Fly   447 QIEDVILHLPGVHEVAVFGIPDEVSTNLTACAVVRNEDELGAQLTEADVKGVVAQHLSDAFHIRG 511
            ::|.::|..|.:.:.||..|||..:.......:||   ::|:.|:|:::.|.||:.:|....|| 
plant   476 ELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVR---KVGSNLSESEIMGFVAKQVSPYKKIR- 536

  Fly   512 GVFFVDNLPKTQNSKVQRRKIWSQLSEATT 541
            .|.|:.::||..:.|:.||    :|::.||
plant   537 KVTFLASIPKNPSGKILRR----ELTKLTT 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 132/539 (24%)
AFD_class_I 45..528 CDD:302604 126/514 (25%)
AT1G20480NP_173472.1 PLN02574 27..562 CDD:215312 133/548 (24%)
4CL 43..557 CDD:213272 132/543 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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