DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and 4CL5

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_188760.3 Gene:4CL5 / 821677 AraportID:AT3G21230 Length:570 Species:Arabidopsis thaliana


Alignment Length:537 Identity:155/537 - (28%)
Similarity:261/537 - (48%) Gaps:92/537 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TGEELTGSQLLEQSRRLAHAFQRLKLQRGDVVGISAKNT-----TYLTEVVIAALLNGTPINPLH 109
            ||..||.:.:....||:|....||.::.||||.:...|:     ::|....:.|:  .|..||.:
plant    70 TGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLAVAYLGAV--STTANPFY 132

  Fly   110 --PDF--DAETTAYMFEITKPKVIFCDLDNYQTLSAVKSSLKFKTEIILLT-----GTLPGVRNI 165
              |:.  .|:.:|....|||.    |.:|....|         |.:.:|:.     |. .||.:.
plant   133 TQPEIAKQAKASAAKMIITKK----CLVDKLTNL---------KNDGVLIVCLDDDGD-NGVVSS 183

  Fly   166 QDLLADGCTGYDE-----KTLFACPHLCGDDTAFIITSSGVTGLPKGVTRSHRSLLNS------A 219
            .|   |||..:.|     :|....|.:..:||..:..|||.|||||||..:|:.|:.|      .
plant   184 SD---DGCVSFTELTQADETELLKPKISPEDTVAMPYSSGTTGLPKGVMITHKGLVTSIAQKVDG 245

  Fly   220 KIPQL-FTSDTVLFCFSPLYWISCIFTL-LASLVNGCRRIITNRPFSVAYFADLVERHQVSFVLT 282
            :.|.| ||::.|:.||.|::.|..:..| |:::..|...:|..| |.:....:|::|::|:.|..
plant   246 ENPNLNFTANDVILCFLPMFHIYALDALMLSAMRTGAALLIVPR-FELNLVMELIQRYKVTVVPV 309

  Fly   283 VPHHMALLAKSP--ERQELAAKMQCVQSFVCSGS-------------KVPMGIWRQLYELLGANR 332
            .|..:....|||  ||.:|::     ...:.||:             |.|..|:.|     |   
plant   310 APPVVLAFIKSPETERYDLSS-----VRIMLSGAATLKKELEDAVRLKFPNAIFGQ-----G--- 361

  Fly   333 FAVLYGLTETGGISKNVG---GPL----GSEGRLLRNVQVRVVDPH-GQSLGPNQTGQILVRLNL 389
                ||:||:|.::|::.   .|.    |:.|.::||.:::|||.. |.||..|::|:|.||.:.
plant   362 ----YGMTESGTVAKSLAFAKNPFKTKSGACGTVIRNAEMKVVDTETGISLPRNKSGEICVRGHQ 422

  Fly   390 RWGGYYHNPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFPIYPKQIEDVILH 454
            ...||.::|:.|..|:..|| ||.|||.|:.||:..:....|..::.|:..:.:.|.::|.:::.
plant   423 LMKGYLNDPEATARTIDKDG-WLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLIS 486

  Fly   455 LPGVHEVAVFGIPDEVSTNLTACAVVRNEDELGAQLTEADVKGVVAQHLSDAFHIRGGVFFVDNL 519
            .|.:.:.||..:.|||:..:....|.|::   |:||||.|||..|.:.:.....|: .|||::.:
plant   487 HPSIDDAAVVAMKDEVADEVPVAFVARSQ---GSQLTEDDVKSYVNKQVVHYKRIK-MVFFIEVI 547

  Fly   520 PKTQNSKVQRRKIWSQL 536
            ||..:.|:.|:.:.::|
plant   548 PKAVSGKILRKDLRAKL 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 154/531 (29%)
AFD_class_I 45..528 CDD:302604 153/527 (29%)
4CL5NP_188760.3 PLN02246 20..567 CDD:215137 155/537 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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