DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and Acsl4

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_997508.1 Gene:Acsl4 / 50790 MGIID:1354713 Length:711 Species:Mus musculus


Alignment Length:597 Identity:126/597 - (21%)
Similarity:207/597 - (34%) Gaps:186/597 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ELTGSQLLEQSRRLAHAFQRLKLQRGDVVG----ISAKNTTYLTEVVIAALLNGT-------PIN 106
            ::.|:..|:  :...||.  .|..:.|.:|    :|.:|.......|...|:.|.       .:|
Mouse    72 DIPGADTLD--KLFDHAV--AKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWINYLEVN 132

  Fly   107 PLHPDFDAETTAYMFEITKPK---VIFCDLDNYQTLSAVKSSLKFKTEIILLTGTLPGVRNIQDL 168
            ....:|.:..||...   |||   .|||: ...:.:.|.::..|:...::.|..||.....:..|
Mouse   133 CRVNNFGSGLTALGL---KPKNTIAIFCE-TRAEWMIAAQTCFKYNFPLVTLYATLGREAVVHGL 193

  Fly   169 ----------------------LAD-GCTGY----DEKTLFACPHLCG----------------- 189
                                  |.| .|..:    |.||:....:..|                 
Mouse   194 NESEASYLITSVELLESKLKAALVDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSVEELGAKPE 258

  Fly   190 -----------DDTAFIITSSGVTGLPKGVTRSHRSLL-----NSAKIPQLFTSDTVLFCFSPLY 238
                       .|.|.::.:||.||.||||...|.:|:     ...:||.|...||.: .:.||.
Mouse   259 NLSVPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDTYI-GYLPLA 322

  Fly   239 WISCIFTLLASLVNGCRRIITNRPFSVAYFADLVERHQVSFV-------LTV--PHHMALLAKSP 294
            .:..:...::....|||         :.|.:.|....|.|.:       .||  |   .|:|..|
Mouse   323 HVLELTAEISCFTYGCR---------IGYSSPLTLSDQSSKIKKGSKGDCTVLKP---TLMAAVP 375

  Fly   295 ERQELAAK--MQCVQSF------------------VCSGSKVPMG---IWRQLYELLGAN----- 331
            |..:...|  |..||..                  :..|...|:.   :::::..|||.|     
Mouse   376 EIMDRIYKNVMSKVQEMNYVQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALLGGNVRMML 440

  Fly   332 -----------RFAVL---------YGLTETGG----------ISKNVGGPLGSEGRLLRNVQVR 366
                       ||..:         |||||:.|          .:..||.||......|::.|..
Mouse   441 SGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEG 505

  Fly   367 VVDPHGQSLGPNQTGQILV---RLNLRWGGYYHNPQET--QVTVTPDG-KWLLTGDHGYFDDEGC 425
            ....|.:   ||..|:|::   .:::   ||:.|.::|  ...|..:| :|..|||.|.|..:||
Mouse   506 GYTVHDK---PNPRGEIVIGGQNISM---GYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHPDGC 564

  Fly   426 LHFQSRDTDVFK-----YNHFPIYPKQIEDVILHLPGVHEVAVFGIPDEVSTNLTACAVVRNEDE 485
            |....|..|:.|     |    :...::|..:.:.|.:..:..|...|:   :.....||.|:.:
Mouse   565 LQIIDRKKDLVKLQAGEY----VSLGKVEAALKNCPLIDNICAFAKSDQ---SYVISFVVPNQKK 622

  Fly   486 LGAQLTEADVKG 497
            |.....:..|:|
Mouse   623 LTLLAQQKGVEG 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 126/597 (21%)
AFD_class_I 45..528 CDD:302604 126/597 (21%)
Acsl4NP_997508.1 LC_FACS_euk1 121..696 CDD:341294 115/544 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839032
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.