DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and bgm

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster


Alignment Length:579 Identity:114/579 - (19%)
Similarity:217/579 - (37%) Gaps:138/579 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTGSQLLEQSRRLAHAFQRLKLQRGDVVGISAKNTTYLTEVVIAALLNGTPINPLHPDFDAETTA 118
            :|..|..::..::|.||.:|.|:....||:.|.|........:.|:.....|..::....|:...
  Fly    77 VTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQ 141

  Fly   119 YMFEITKPKVIFC-DLDNYQTLSAVKSSL-KFKTEIILLTGTLPGVR--------------NIQD 167
            ::.|.:..:::.. |......:.|::..| |.|..|.:.....|.::              |:.|
  Fly   142 HVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIESMNVSD 206

  Fly   168 LLADGCTGYDEKTLFACPHLCGDDTAFIITSSGVTGLPKGVTRSHRSLLNSAK-----IPQLFTS 227
            :.....|..:...:..|  .|      ::.:||..|:||||..||.::....:     :.::...
  Fly   207 VEDQYMTRLENVAINEC--CC------LVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVG 263

  Fly   228 DTVLFCFSPLYWIS--------------CIF---------TLLASLVN-------GCRRI---IT 259
            ...:..:.||..::              ||:         ||:.||.:       |..|:   ..
  Fly   264 AESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQ 328

  Fly   260 NRPFSVAYFADLVERHQVSFV--LTVPHHMALLAKSPE--RQELAAKMQCVQSFVCSGSKVPMGI 320
            .|..:||..:..:::...|:.  :|:.|:|....||..  |.::|      :|.:.|..|..:|.
  Fly   329 ERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIA------KSLIMSKVKQALGF 387

  Fly   321 WRQL---------------YELLGANRFAVLYGLTETGG-----ISKNVGGPLGSEGRLLRNVQV 365
            .|.|               |.|....:....:|::||.|     :..:||  |.:.|:.|...:.
  Fly   388 DRVLTLASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVG--LNTIGKTLPGCES 450

  Fly   366 RVVDPHGQSLGPNQTGQILVRLNLRWGGYYHNPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQS 430
            :.::...     |..|::.:|....:.||..|.::|:.:: .|..||.:||.|:.||:|.:....
  Fly   451 KFINKDA-----NGHGELCIRGRHVFMGYIDNKEKTEESL-DDDCWLHSGDLGFVDDKGYVSLTG 509

  Fly   431 RDTDVF---KYNHFPIYPKQIEDVI-LHLPGVHEVAVFGIPDEVSTNLTACAVVRNE-------- 483
            |..::.   ...:.|  |..||:.| ..|..:....:.|   |....||....::.|        
  Fly   510 RSKEIIITAGGENIP--PVHIENTIKKELDAISNAFLVG---EQRKYLTVLITLKTEVDKDSGEP 569

  Fly   484 -DELGAQLTEADVKGVVAQH--LSDAFHIRGGVFFVDNLPKTQNSKVQRRKIWSQLSEA 539
             |||..: :...||.:..:|  :||       :......|          |:|..:.:|
  Fly   570 LDELSHE-SSVWVKSLGVEHKTVSD-------ILAAGPCP----------KVWKSIEDA 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 111/570 (19%)
AFD_class_I 45..528 CDD:302604 111/566 (20%)
bgmNP_001285923.1 FAA1 32..666 CDD:223953 114/579 (20%)
ACSBG_like 69..665 CDD:213299 114/579 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452234
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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