DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and CG3961

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:592 Identity:125/592 - (21%)
Similarity:212/592 - (35%) Gaps:176/592 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VVGISAKNT---------TYLTEVVIAALLNGTPINPLHPDFDAETTAYMFEITKPKVIFCDLDN 135
            ::||.::|.         .|...:|:.         ||:.....:..|::...|..:|:..:.|.
  Fly   160 LIGIYSQNRPEWILYEQGCYSFSLVVV---------PLYDTLGPDACAFIIRQTDMQVVIVEDDG 215

  Fly   136 YQTLSAVKS--SLKFKTEIILLTGTL---PGVRNIQ-----DLLADGCTGYDEKTLFACPHLCGD 190
            ...:...|:  |||....|..:..|.   ...|.||     |:...|..|...:.......||  
  Fly   216 KAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHPEVPPTAEDLC-- 278

  Fly   191 DTAFIITSSGVTGLPKGVTRSHRSLLNS--AKIPQL----FTSDTVLFCFSPL------------ 237
               .:..:||.||.||||..:|.:::..  :.|.|:    ..:..|:..|.||            
  Fly   279 ---TVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGDVMVSFLPLAHMFERCCENGM 340

  Fly   238 YWI-SCIFTLLASLVNGCRRIITN-----RPFSVAYFADLVER--------HQVSFVLTVPHHMA 288
            |:: .|:     ...:|..:.:||     :|..:.....|:.|        ...|.:.....:||
  Fly   341 YYVGGCV-----GFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQNDISASGLKRGLFNMA 400

  Fly   289 LLAKSPERQELAAKMQCVQSFVCSGSKVPMGIW-----RQLYELLGAN-RFAVL----------- 336
            :.||..|              :..|.....|.|     :::::..|.| |..|:           
  Fly   401 MRAKEKE--------------IARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLT 451

  Fly   337 -------------YGLTE-TGGIS---------KNVGGPLGSEGRLLRNVQVRVVD-PHGQSLGP 377
                         ||.|| ||.|:         .:||.|:....       |::|| |..:....
  Fly   452 FMRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNA-------VKLVDVPEMEYFAN 509

  Fly   378 NQTGQILVRLNLRWGGYYHNPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFP 442
            ..||::.||.:..:.|||.:|::|...:..:| |..|||.|.:...|.|....|...:||.:...
  Fly   510 QNTGEVCVRGSNVFHGYYKDPEKTAEAIDSEG-WHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGE 573

  Fly   443 -IYPKQIEDVILHLPGVHEVAVFGIPDEVSTNLTAC---AVVRNEDELGAQLTEADVKGVVA--- 500
             |.|::||::......|::|.|:|      .:|.:|   .||.:.|.|....||.:|:|.::   
  Fly   574 YIVPEKIENIYTLSQYVNQVYVYG------ESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLC 632

  Fly   501 -------------------------QHLSDAFHIRGGVFFVDNLPKTQNSKVQRRKIWS----QL 536
                                     :.:.| .::....|.|.|...|...|.:|.::.|    ||
  Fly   633 NNKNVKELIMNDMLNWGKQSGLKSFEQVKD-IYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQL 696

  Fly   537 SEATTHL 543
            .:...||
  Fly   697 EDMYKHL 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 120/575 (21%)
AFD_class_I 45..528 CDD:302604 119/571 (21%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 123/588 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452246
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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