DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and hll

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:526 Identity:125/526 - (23%)
Similarity:196/526 - (37%) Gaps:101/526 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PDMTLGEVALIILRLYSDKVMQVYDPTGE------ELTGSQLLEQSRRLAHAFQRLKLQRGDVVG 82
            |..|:.|........|||....|::..|.      .||..:..|:..:.|.....:.::....||
  Fly    34 PPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVG 98

  Fly    83 ISAKNTTYLTEVVIAALLNGTPINPLHPDFDAETTAYMFEITKPKVIFCDLDNYQ---TLSAVKS 144
            |.|.|..........||..|..:..::|...||...::....:..|  |.:|:.|   .|.|:|.
  Fly    99 ILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSV--CVVDDAQQMAKLRAIKE 161

  Fly   145 SLKFKTEIILLTGTL-------PGVRNIQDLLADGCTG-YDEKTLFACPHLCGDDTAFIITSSGV 201
            .|.....:|.|.|..       ||..:.|.|.....:. ..|:.|.....:..::.|.:|.:||.
  Fly   162 RLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARESRIRANECAMLIFTSGT 226

  Fly   202 TGLPKGVTRSHRSLLNSAK-------------------IPQLFTSDTVLFCFSPLYWISCIF--- 244
            .|:||.|..||.:|:...|                   :|....:..:...|..|....|:.   
  Fly   227 VGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTFAD 291

  Fly   245 --TLLASLVNGCRRIITNRPFSV-AYFADLVERHQVSFVLTVPHHMALLAKS----PERQE--LA 300
              .|..:|:...|:....:.|.| ..|..|.||...:.....|:...|||::    .|.|.  :|
  Fly   292 KDALKGTLIKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQTTLMA 356

  Fly   301 AKMQCVQS-----FVCSGSKVPMGIWRQLYELLGANRFAVL------------------------ 336
            .|...:..     ..|.       :.:.:.|::|.:...|.                        
  Fly   357 GKSPSIYGNAKYWLACR-------VVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALGE 414

  Fly   337 -YGLTET-GGISKNVG-GPLGSEGRLLRNVQVRVVDP--HGQSLGPNQTGQILVRLNLRWGGYYH 396
             ||::|| |.|:.||. ..|.|.|:....|.:::.:|  :||       |:||:|..|.:.||..
  Fly   415 CYGMSETSGAITLNVDISNLYSAGQACEGVTLKIHEPDCNGQ-------GEILMRGRLVFMGYLG 472

  Fly   397 NPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQSRDTD-VFKYNHFPIYPKQIEDVI-LHLPGVH 459
            .|.:|:.||..|| ||.:||.||.|.:|.|....|..: :.......|.|..||::| ..||.|.
  Fly   473 LPDKTEETVKEDG-WLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPCVS 536

  Fly   460 EVAVFG 465
            .|.:.|
  Fly   537 NVLLIG 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 125/526 (24%)
AFD_class_I 45..528 CDD:302604 119/505 (24%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 117/498 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452222
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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