DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9993 and Dip2c

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:601 Identity:137/601 - (22%)
Similarity:211/601 - (35%) Gaps:182/601 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTGSQLLEQSRRLA-HAFQRLKLQRGDVVGISAKNTTYLTEVVIAALLNG------TPI--NPLH 109
            ||..||.:::.::| ...:|..||.||.|.:     .|...:.:.|...|      .||  .|.|
  Rat  1062 LTCVQLHKRAEKIAVMLMERGHLQDGDHVAL-----VYPPGIDLIAAFYGCLYAGCVPITVRPPH 1121

  Fly   110 PDFDAET--TAYMF-EITKPKV-----IFCDLDNYQTLSAVKSSLKFKT-EIILLTGTLPGVRNI 165
            |...|.|  |..|. |:::...     :.|.|...:..:|   ::..:| .:||.|..||..|..
  Rat  1122 PQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAA---AVDVRTWPLILDTDDLPKKRPA 1183

  Fly   166 QDLLADGCTGYDEKTLFACPHLCGDDTAFIITSSGVTGLPKGVTRSH---RSLLNSAKIP-QLFT 226
            |......                .|..|::..|...||:..||..||   .:...|.|:. :|:.
  Rat  1184 QIYKPSN----------------PDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYP 1232

  Fly   227 SDTVLFCFSPLYWISCIFTLLASLVNGCRRII-------TNRPFSVAYFADLVERHQVSFVLTVP 284
            |..|..|..|...:..:...|.|:.:|.:.|:       ||    .|.:...|.:::|.......
  Rat  1233 SREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELETN----PALWLLAVSQYKVRDTFCSY 1293

  Fly   285 HHMALLAKSPERQ---------ELAAKMQCV------------QSFVCSGSKVPMGIWRQLYELL 328
            ..|.|..|....|         :|:....||            |||            .:|::.|
  Rat  1294 SVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSF------------SKLFKDL 1346

  Fly   329 GANRFAV------------------LYGLTETGGISKNVGGP----LGSEGRLLRNVQVRVVD-- 369
            |.:..||                  |:.|.|.|     ..||    :..:.|.||:.:||:|:  
  Rat  1347 GLHPRAVSTSFGCRVNLAICLQPHRLWTLAEQG-----TSGPDPTTVYVDMRALRHDRVRLVERG 1406

  Fly   370 -PHGQSLGPNQTGQIL--VRLNLRWGGYYHNPQETQVTVTPDGK------WLLTGDH--GYF--- 420
             ||  ||...::|:||  ||:.:.      ||:    |..|.|.      |:.:..:  |||   
  Rat  1407 SPH--SLPLMESGKILPGVRIIIA------NPE----TKGPLGDSHLGEIWVHSAHNASGYFTIY 1459

  Fly   421 DDEGCL--HFQSR----D-------------------TDVFKYNHFPIYPKQIEDVILHLPGV-- 458
            .||...  ||.||    |                   ||.....|..:|.....|..:.|.|:  
  Rat  1460 GDESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRY 1524

  Fly   459 HEVAVFGIPDEVSTNLTACAVVRNEDEL-------GAQLTEADVKGVVAQ-HLSDAFHIRGGVFF 515
            |.:.:.........::|.|||....:.|       |::....|:..:|.. .|.:.:.|.|.|..
  Rat  1525 HPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLIVGVVVV 1589

  Fly   516 VD--NLPKTQNSKVQR 529
            ||  .:|.....:.||
  Rat  1590 VDIGVIPINSRGEKQR 1605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 137/601 (23%)
AFD_class_I 45..528 CDD:302604 135/598 (23%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 137/601 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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